Transcript Information: R_Transcript_114587.p1


Annotated TAIR IDAT5G40840.2
Annotated Gene NameRad21/Rec8-like family protein
Annotated Gene Symbol(s)SYN2
Annotation TypeOrtholog
Chromosome Positionchr5:16359611-16363722 | Reverse length=810
E-Value1.5E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.205751372055
Replicate 23.9670429357983
Replicate 34.4335621153843
Condition 2: 8 Hour
Replicate 14.4006854052653
Replicate 23.4005027684752
Replicate 33.764158884412
Condition 3: 24 Hour
Replicate 15.9245954136011
Replicate 24.8785826117406
Replicate 36.6234682385849


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_114587.p1 GENE.R_Transcript_114587~~R_Transcript_114587.p1 ORF type:complete len:651 (+),score=148.63,Rad21_Rec8_N|PF04825.9|1e-23,Rad21_Rec8|PF04824.12|4.7e-09 R_Transcript_114587:202-2154(+)
ATGAGAACCACTCTTAAATCCCAAACCCAAACTTTGGGTCACAACCAATTTACTGGTTTCTTAAAGAGTGATAGAAAAGAAGAACAAGTAGAAGTAGAAGGAGAGAGAAAATCATTAGGAATGTTCTACTCACAATGGCTATTATCAAAGAACAGTCCATTAGCAGCCATCTGGGTTGCTGGTTGTTGCTTCAAACGCCTCAAGAAAAGCCAAGTCACTGACACTCATATTCCTTCTTCTGTTGATAAAATTCTTCTCGAAGGATTGCCTTCTGTTACATATAGAATATTGGCTTATCTTCTTCTTGGAGTGGTGAGAATATATTCTAGAAAAGTAGAATATCTATACCAGGACTGCCATGAAACTGTCTCCGACATAAATAGACATGGTGTTGGAAAAAAGGTAGTCCCCTTTAAAGATCTTGTACGCTCTGCTAGCTCCATCATCCTGCCAGAGAGATATGAACTTGACGCTTTCCGACTGGAGTTTGCAGAAGGTGCATTTGGAGGCAATGTTAAACGAAAGGAAGACATTATTCTTCAAGATGCAACTGCAAGGGAAGATACATTTGAGCCGCACTCTTTCGACAAGAATCCATTTGATGAGGTCTGTCCTGACTGGGAGGAAAACTTTGATGCGCAGACATCAGCTTGGATCGCTGTGCAGCCGGAAACTTGTTCTGTAACTCAGACACCTGAGAAAGTGGCTGCTGATAAGGAAACTTCTGCCAGTGCCTGTACTCCTCCCGACAAAGTCTTTTCTCCTCAAAGGATGGAAATTGTTATTGAGGAAAGGCCTTCAGACAGAAAGAAAAACGTTCAAACTAGCAAGGAGAAGCTTCGAGAGTTGAGGTTCACACAAGAAGAGTGCATGGATGATATTATCTGTGGATTGGATGTGGAACTTCTCAATCTTATCAATGAATATCAAGTAGAAAAAGTTGATGATGGCGATAGGAATTATTTAGAGAAGGCAGAATTACAAAATCATGACCATGTTGTATTGGCAGACAAGGAAGTACCTTTCCCCATGGAGAAGCCTCTTAATATAGATGTCCCAGATGATACAGGTGGCACTAACATAGAGTTTCTAGCAGTATCTACTCCAGCTAAGAGGGAGAGTATTAAAAGACTCAAAAAAAGAAAATGCATTGTTGATGAGACTTTGTTGCTGAATAATCAGACAATGAAGCAGACCATCAATGACGCCAGTGACTTGGTATGCAAGAGAAGGAAGGCTCCTCATACTGTCATTGATATATGGAGATTTTCTCTCATTCCCAACCTTTCCAAGAATTTCTCTCAGCCTCTAATACCTTGTGCTGCCGCTACACTGGAGCAGCTACATGTCCAGTGTGTAAAGAGGACCGAAAGAGCTGAAGCATCTTCAAGTGCAGCAGCTGGCCTAACAGAAACTACTCAAACTCCTGTTAAACATCAAGGTGCAATTTCACCAAGGACCCCGGCTGATAGCAGGTCAACAACAATTGCGCCAGGAACACCAGTACGTGCTCCAACATCAGCAAGAGTTTTTGGAGATCCCAGGACTGTGGATTCGGATGGGGAAGGCCCTGTTCACATGCATGAAAATATGAGGAAGGAGTTGTCTATACATGAGGAACAAGATCGCGATCCTAATCTGATGGATGAGGTGGAAGCAAATGAAGGCGACAGCCAAGAACTCCATAAGAGCAAGGAGGGACTGTCTGCTAGAACCAGAACGGTGGCCAGATACCTGCATCAAGTAATCCACAAGAAGCGGCAGCAAGGGGAGAAAGCTGTGACTTTGCTTCCCATTTTTGAACGTAAAACAAAGGCCGAAAATGCACGATTGTTTTTTGAATTACTGGTCTTGACTTCTGGAGGATTCATGAAAGTTAAGCAAGAGAGAGCTTATGATGATGTGCTTCTGCAAGAAACGTCGAAGATGGAAACAACCTTAGCAAGCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_114587.p1 GENE.R_Transcript_114587~~R_Transcript_114587.p1 ORF type:complete len:651 (+),score=148.63,Rad21_Rec8_N|PF04825.9|1e-23,Rad21_Rec8|PF04824.12|4.7e-09 R_Transcript_114587:202-2154(+)
MRTTLKSQTQTLGHNQFTGFLKSDRKEEQVEVEGERKSLGMFYSQWLLSKNSPLAAIWVAGCCFKRLKKSQVTDTHIPSSVDKILLEGLPSVTYRILAYLLLGVVRIYSRKVEYLYQDCHETVSDINRHGVGKKVVPFKDLVRSASSIILPERYELDAFRLEFAEGAFGGNVKRKEDIILQDATAREDTFEPHSFDKNPFDEVCPDWEENFDAQTSAWIAVQPETCSVTQTPEKVAADKETSASACTPPDKVFSPQRMEIVIEERPSDRKKNVQTSKEKLRELRFTQEECMDDIICGLDVELLNLINEYQVEKVDDGDRNYLEKAELQNHDHVVLADKEVPFPMEKPLNIDVPDDTGGTNIEFLAVSTPAKRESIKRLKKRKCIVDETLLLNNQTMKQTINDASDLVCKRRKAPHTVIDIWRFSLIPNLSKNFSQPLIPCAAATLEQLHVQCVKRTERAEASSSAAAGLTETTQTPVKHQGAISPRTPADSRSTTIAPGTPVRAPTSARVFGDPRTVDSDGEGPVHMHENMRKELSIHEEQDRDPNLMDEVEANEGDSQELHKSKEGLSARTRTVARYLHQVIHKKRQQGEKAVTLLPIFERKTKAENARLFFELLVLTSGGFMKVKQERAYDDVLLQETSKMETTLASC*

Click here to download the sequence:
Link to NCBI Protein BLAST