Transcript Information: R_Transcript_114727.p1


Annotated TAIR IDAT1G26520.1
Annotated Gene NameCobalamin biosynthesis CobW-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:9163448-9165594 | Reverse length=374
E-Value1E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4410232332673
Replicate 21.0129794060495
Replicate 30
Condition 2: 8 Hour
Replicate 13.5440067686802
Replicate 21.7653327769357
Replicate 30.55728629097679
Condition 3: 24 Hour
Replicate 10.30207641089084
Replicate 20.87060232462805
Replicate 31.5359792762735


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_114727.p1 GENE.R_Transcript_114727~~R_Transcript_114727.p1 ORF type:3prime_partial len:228 (+),score=51.90,cobW|PF02492.15|4.9e-38,cobW|PF02492.15|0.093,DUF258|PF03193.12|0.0043,DUF258|PF03193.12|1.2 R_Transcript_114727:50-682(+)
ATGGATGATGATGAAGAGGAGCCCCCAATCGCCATTGAAATCGATGGAATCCAAAACCCTAACCGTAACCCTAATTCTCAAAACGACGACGTTTCCGTCGGCGTCACCGTCATAACCGGCTACCTCGGCGCCGGCAAGTCAACTCTGGTGAATTACATACTTAATACGCAACACGGGAAGAGAATAGCGGTGATATTGAATGAGTTTGGGGAGGAAATAGGGGTAGAAAGGGCTATGATCAATGAAGGAGATGGTGGTGCTCTTGTTGAAGAATGGGTTGAGCTTGCTAATGGCTGTATTTGTTGTACTGTTAAGCACAGTCTTGTTCAAGCCTTGGAGCAGCTTGTTCAAAGAAAGGAAAGACTTGATCACATATTACTAGAGACCACTGGCTTGGCAAACCCAGCTCCTCTTGCATCTGTTCTGTGGTTGGATGATCAGCTGGAGTCTGCTGTCAAACTCGATTCAATTATCACTGATGTTGTTATACTTAACAAGGTTGATTTGATTTCTCCTGAGGATCCTGAAGGTACTCTGAAGGATCTGGAGAAGAAGATACAAAAGATTAATTCTCTTGCAAATATCATCAGGACAGTTCGTTGTCAAGTTGACTTGTCCGAGATATTGGATTGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_114727.p1 GENE.R_Transcript_114727~~R_Transcript_114727.p1 ORF type:3prime_partial len:228 (+),score=51.90,cobW|PF02492.15|4.9e-38,cobW|PF02492.15|0.093,DUF258|PF03193.12|0.0043,DUF258|PF03193.12|1.2 R_Transcript_114727:50-682(+)
MDDDEEEPPIAIEIDGIQNPNRNPNSQNDDVSVGVTVITGYLGAGKSTLVNYILNTQHGKRIAVILNEFGEEIGVERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVLWLDDQLESAVKLDSIITDVVILNKVDLISPEDPEGTLKDLEKKIQKINSLANIIRTVRCQVDLSEILDC

Click here to download the sequence:
Link to NCBI Protein BLAST