Transcript Information: R_Transcript_114728.p1


Annotated TAIR IDAT1G26520.1
Annotated Gene NameCobalamin biosynthesis CobW-like protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9163448-9165594 | Reverse length=374
E-Value2.7E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.142131887398
Replicate 26.550845729885
Replicate 310.078964542307
Condition 2: 8 Hour
Replicate 17.3457594841736
Replicate 28.2288045175563
Replicate 311.617030797048
Condition 3: 24 Hour
Replicate 113.131865734247
Replicate 29.3514297696048
Replicate 315.846698193314


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_114728.p1 GENE.R_Transcript_114728~~R_Transcript_114728.p1 ORF type:3prime_partial len:250 (+),score=58.16,cobW|PF02492.15|1.4e-53,DUF258|PF03193.12|0.0058,DUF258|PF03193.12|2.1 R_Transcript_114728:27-749(+)
ATGGATGACGATGAAGAGGAGCCCCCAATCGCCATTGAAATCGATGGAATCCAAAACCCTAACCGTAACCCTAATTCTCAAAACGACGATGTTACCGTCGGCGTCACCGTCATCACCGGTTACCTCGGCGCCGGCAAGTCAACTCTGGTGAATTACATACTTAATACGCAACACGGGAAGAGAATAGCGGTGATATTGAATGAGTTTGGGGAGGAAATAGGGGTAGAAAGGGCTATGATCAATGAAGGAGATGGTGGTGCTCTTGTTGAAGAATGGGTTGAGCTTGCTAATGGCTGTATTTGTTGTACTGTTAAGCACAGTCTTGTTCAAGCCTTGGAGCAGCTTGTTCAAAGAAAGGAAAGACTTGATCACATATTACTAGAGACCACTGGCTTGGCAAACCCAGCTCCTCTTGCATCTGTTCTGTGGTTGGATGATCAGCTGGAGTCTGCTGTCAAACTTGATTCAATTATCACTGTTGTTGATGCAAAAAACCTTCATTACCAACTCGAACGACACGATGATTCAGCTTCATTTCCTGAAGCTTTCCATCAAATTGCATTTGCGGATGTTGTTATACTTAACAAGGTTGATTTGATTTCTCCTGAGGATCCTGAAGGTACTCTGAAGGATCTGGAGAAGAAGATACAAAAGATTAATTCTCTTGCAAATATCATCAGGACAGTTCGTTGTCAAGTTGACTTGTCCGAGATATTGGATTGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_114728.p1 GENE.R_Transcript_114728~~R_Transcript_114728.p1 ORF type:3prime_partial len:250 (+),score=58.16,cobW|PF02492.15|1.4e-53,DUF258|PF03193.12|0.0058,DUF258|PF03193.12|2.1 R_Transcript_114728:27-749(+)
MDDDEEEPPIAIEIDGIQNPNRNPNSQNDDVTVGVTVITGYLGAGKSTLVNYILNTQHGKRIAVILNEFGEEIGVERAMINEGDGGALVEEWVELANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVLWLDDQLESAVKLDSIITVVDAKNLHYQLERHDDSASFPEAFHQIAFADVVILNKVDLISPEDPEGTLKDLEKKIQKINSLANIIRTVRCQVDLSEILDC

Click here to download the sequence:
Link to NCBI Protein BLAST