Transcript Information: R_Transcript_114840.p1


Annotated TAIR IDAT1G80260.1
Annotated Gene NameSpc97 / Spc98 family of spindle pole body (SBP) component
Annotated Gene Symbol(s)emb1427
Annotation TypeOrtholog
Chromosome Positionchr1:30175924-30180511 | Forward length=995
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3339208123234
Replicate 23.639358738825
Replicate 34.6831552418801
Condition 2: 8 Hour
Replicate 13.7272927753029
Replicate 24.0746495799494
Replicate 36.0908737859521
Condition 3: 24 Hour
Replicate 16.4026773490597
Replicate 24.7786394262918
Replicate 36.3231146873259


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_114840.p1 GENE.R_Transcript_114840~~R_Transcript_114840.p1 ORF type:complete len:900 (+),score=165.61,Spc97_Spc98|PF04130.9|6.8e-116 R_Transcript_114840:230-2929(+)
ATGGAAGAACCCACAAGTTTTATCAGTAAGATCTATAATAATTCCTCTCCTGCTGGCATTTACATTATAACCTCAGTCTCTTCCTCAAACACCTCTGAATTTGAGCTGGTTCAAGGGATCCTGCTTATATTGCAGGGTCATTCAAGTACCATTTTTAACTGGGATGAAAAGGGTTGCCGTTTTTATCCCAAAATTGGGATATATGTTCCCCATCTTTCTCTTGCAAGTATACACGAAGTTCTCAATCAGTTCTTATATACAGCGACGTGTTTGAGGCTAGTGGAGGATGTTGTCAAAAGGGTTGAGAGAATCGGGACATCGTTTCCTACGTTGATGGCATTTTCGAGTTCTGTTTCTGCTTGGCTTAAGAGGCTGCGGGACATTGCTTTGAAGGAGGAAGTGAAGATAACTGAGTCTAATGCTAGGACTGTTCCTACACTCCTGGGACTGGCGAACTCTTTGTCCAGTCTTTGCTCAGGAGCCGAATTTTTATTACAAATAGTTCATGAAGCAGTACCACAAATGTGGCTTGATTCTTTGCCTTCTGCGGCTGCTGCAGACATTGCTGTCCACATACTTGATCTTCTGTACAAGAGGCTAAATGAAGCTTGTCTTGTGCAGGGTGGTGAGGAAGAGGCATACAGGATGCTCCTTTATTTATTTGTTGGAAGTCTGGTACCATATATTGAGAGTCTTGATTCCTGGATTTATGAGGGAATCCTCGATGATCCTTATAATGAGTTGTTCTTCTATGAAAATAAGTCAGTGTCAATCAATGATACTGAATTTTGGGAGAAGAGCTATCTAATGAGATCTTTATCACATCATAAGTTAGACCCTGAGATTTCAGGCATAGCTCGTAAGCATCAAGCATGCCCATTGTTTATTAAAGACATAGCTAAAGAAGTTGTCTCTGCGGGGAAGTCACTTCAGCTGATCAGGCATGTTCCAATGACTTCAAATTTGACAGCATCGACTAGGAGCAGATATGATGAGTTTGACAGTTTTAGAAGTCCTTGTGCTGCTACTGATCTAGGTGAAATGCATAGAATACGCAGTATAGCTGGGTTGACTCTGGTGGAAGTCTTTTTTGTGTCAATTTGTGGTCTTCTAGGTCATGGTGATCATGTCTACAATTACTTTTTGCAAGATGACACAAGTATATGTGGATACAAAGTCAAAAGAGAAACATATAGAGAAAAAGATGGGAGTACTCCTGCTTTGACAAGCCAAAGAAAGAATTGGGTCGAGTTTTTGGATAGTGTACTGAGGGAAAGAGAGTCTGCTAAAAAAGCTCAAGCATCACTGTGTCATTTGAAGGAAGAAAATGAGGGGGCCAGTGCTGTAAAGGAACTTCAATCAATCAAATCTTTCTTTCCTGAAAATCCAGTTATTACTGTGTGTAGAAAGTTCCTGAAAAACGACAAAAATGAGTGGAGCACCTTGAATCTGGCAAAGCATTCTCACCTTCCCCCATTAAATGACAACGATTTATGGGATGCAATTTTCAAGGATGAGAGCAGACAAGATTCACCAGCTAGACAAACCAATTATGCTTTTGGGTTTCAATTCAGTGAATCTCGACATGTTCATTCTTTAAACGATGCGAATTTTCTGGAAAAGATGTTTCCCTTTCCTACAATTCTTCCTTCATATCAGGGAGAGGTTCCTATGTCCGAACTCTTACCACTACAGAAAAACAGCACTTTGTCATCAAAAATTCTTCGCTGGGTTCAAACAGCTGAACCAAAGGGCTGCCCACTTCCTATGATTGTAATGCAGGAATGTCTTATCGTCTATGTCAAGAAGCAGGTGGATACCATTGGAAGTCATATGCTGTCAAAATTACTCAAGGATTGGAGATTGATGGATGAGTTGGGAGTGCTGCGTGCTATATATTTGCTTGGTTCAGGAGATCTTCTCCAGCACTTTCTGACAGTGATCTTCAGCAAGCTGGATAGAGGTGATTCATGGGATGATGATTTTGAGTTAAATATGATATTGCAGGAGTCAATTAGAAATTCTGCTGATGGAATGCTACTGAGTGCGCCTGACACGTTGGTTGTCTCAATCTCAAAACCTCATAGTCTTGATGGTAATGATCAGCAAAATGTTGCCAACTTTGCCTCAACTCTTCGTAAAAATCCTGAGAACAGCTTGGGCATTAATGGTCTTGATGTACTCAACTTCACCTACAAGGTTTCTTGGCCACTTGAACTTATTGCTAATGCAGAGGCAATTAAGAAGTATAACCAGGTGATGCATTTCCTGCTGAAAGTTAAGCGTGCTAAGTATGTACTTGACAAAGCTCGGAGATGGATATGGAAGGGAAAAGGTGCAGTTACAGTCACCTTTAAACATCACTGGCTAGTGGAGCAGAAACTTCTTCACTTTGTGGATGCTTTTCATCAGTATGTGATGGATAGAGTCTATCATAGTGCATGGTGTGAGATGTGCCAAGGTATGGCTGCTGCTCATTCTCTGGATGAAGTGATTGAAGTTCATGAAGCCTACCTGCTATCAATCCAAAGGCAATGCTTTGTTGTCCCAGATAAGCTGGGAGCGTTAATAGCGAGTCGAATCAACACCATCCTCGGATTGTCATTGGACTTTTACTCGATACAACAAACACTCAATAGTGGTGGTGTTTCTGCCATCAAAGCCAGATGTGAGATGGAAGTAGACCGGATTGAGAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_114840.p1 GENE.R_Transcript_114840~~R_Transcript_114840.p1 ORF type:complete len:900 (+),score=165.61,Spc97_Spc98|PF04130.9|6.8e-116 R_Transcript_114840:230-2929(+)
MEEPTSFISKIYNNSSPAGIYIITSVSSSNTSEFELVQGILLILQGHSSTIFNWDEKGCRFYPKIGIYVPHLSLASIHEVLNQFLYTATCLRLVEDVVKRVERIGTSFPTLMAFSSSVSAWLKRLRDIALKEEVKITESNARTVPTLLGLANSLSSLCSGAEFLLQIVHEAVPQMWLDSLPSAAAADIAVHILDLLYKRLNEACLVQGGEEEAYRMLLYLFVGSLVPYIESLDSWIYEGILDDPYNELFFYENKSVSINDTEFWEKSYLMRSLSHHKLDPEISGIARKHQACPLFIKDIAKEVVSAGKSLQLIRHVPMTSNLTASTRSRYDEFDSFRSPCAATDLGEMHRIRSIAGLTLVEVFFVSICGLLGHGDHVYNYFLQDDTSICGYKVKRETYREKDGSTPALTSQRKNWVEFLDSVLRERESAKKAQASLCHLKEENEGASAVKELQSIKSFFPENPVITVCRKFLKNDKNEWSTLNLAKHSHLPPLNDNDLWDAIFKDESRQDSPARQTNYAFGFQFSESRHVHSLNDANFLEKMFPFPTILPSYQGEVPMSELLPLQKNSTLSSKILRWVQTAEPKGCPLPMIVMQECLIVYVKKQVDTIGSHMLSKLLKDWRLMDELGVLRAIYLLGSGDLLQHFLTVIFSKLDRGDSWDDDFELNMILQESIRNSADGMLLSAPDTLVVSISKPHSLDGNDQQNVANFASTLRKNPENSLGINGLDVLNFTYKVSWPLELIANAEAIKKYNQVMHFLLKVKRAKYVLDKARRWIWKGKGAVTVTFKHHWLVEQKLLHFVDAFHQYVMDRVYHSAWCEMCQGMAAAHSLDEVIEVHEAYLLSIQRQCFVVPDKLGALIASRINTILGLSLDFYSIQQTLNSGGVSAIKARCEMEVDRIEK*

Click here to download the sequence:
Link to NCBI Protein BLAST