Transcript Information: R_Transcript_11486.p1


Annotated TAIR IDAT1G77680.1
Annotated Gene NameRibonuclease II/R family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29192188-29195963 | Reverse length=1055
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.404089426285
Replicate 211.377020188776
Replicate 315.236036138011
Condition 2: 8 Hour
Replicate 18.9428595989479
Replicate 29.9153128311421
Replicate 317.149681791295
Condition 3: 24 Hour
Replicate 115.650170336457
Replicate 211.545025123035
Replicate 314.88041744583


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11486.p1 GENE.R_Transcript_11486~~R_Transcript_11486.p1 ORF type:complete len:1087 (+),score=213.90,RNB|PF00773.15|4.4e-99 R_Transcript_11486:362-3622(+)
ATGGGGATGATAGTTGTTGAGCAACAACCGCAATCTGGCTCCGATGTTGTCGATAAGAAGAAGAAGCGTCGATCCAGTCGCCGCTCCAAGAATTCTTCTCCTAATGTTGGCATATGTTTTCTAGGGTCAGGAGGGTCCATTGAAGTAACAGCACAACATCAACAAACATCTCAGAGTTTCCAAAACTGTAACATCACTAAAAATGGTTCGTCCTCGAAGCAGGGGACAAACAAAGCATCCAATGTTGCATTCAATTCCCTCCCTACAATGCATTTAAATGATAACAGAGCAACCTTTGAGCCCAACAATAGCGTGAAGGTTTTTTCGAAGTCATGTCCACTTGCAAATACATTGGAGAAGTCGGGTAGATTAGATGATGAGAATAACTTTGTTCCACCTTATCTAGTTGATGGGTGTAGCAAGCAAAACCGTTTTGATCCTCACTGGCCTTTGGACGTTGTTAAGGAGGCATTGCAGAGAGGAGAGGTCTTCCAAGCAACACTTCGCGTGAATGCACATAATAGACTCGAGGCATACTGCACAATTGAAGGCGTTGCTACTGATATTCTTATAAATGGAATCCCATTGCAAAACAGAGCTGTAGAAGGGGATGTTGTTGCTGTTAAGGTTGATCCACCTTCGTTGTGGAGTAAGATGAAAGGATCAGCAGCGTCTGCGAACAATACATCTCCTAGTGATGATTGTGACCCTTCTTGTAGCATTGAGATCACTCCTGAGACTTCCAAGGGGAAAGAAAAGGTTGATTCGGAATTGGGTTACCTTCCTGTAACTTGTTCATCTAAGAATGCAGATGGATTTTACGATATGAATGGCACTTACTCTGATGGAAATATTCAAGAATTGAGTGGAAGAATGAACTACATACATGTTAATGGTCATCATCACTCCGGTTTAGACCCTTCACTTGAAGGTTGCTCCCATGTAGAGAATTTAATTGCGGATTCAGTTGAGAAATTATGTCAGTCAGTCGTCTCATTTTCGTCAAAAAGACCAACTGGTAGGGTTGTGGCAATTATTGAACCGTCTCCCCGTAGGGATACTATTGTGGGTTTTCTCAATATTAAATGGTGGCTTTCTAGCCGGGAGGGTTGCACAAAAGATAATAGGACTACAAATCTGCGGCCTGTTTCCAACTCTGATTACATTCATTTAACACCGTCTGACCCTAAGTTTCCCAAGATGATTGTCCTTGTAAGGTCATTGCCAGATGCTCTCATGAAAAGATTGGATGATGGAGATGCATCAGTGGGATCAGAACTTGTTGCTGCACGGATCGATTGTTGGACGGAGGAGAGTTTTCTTCCACAAGCCTGTGTTATACATACCTTCGGGCATGGTGAAGAAGTGGAAGCGCGGATTGCATCTATTCTGTTTGAAAATGCAATCAGCTGTTCTGAATTTTGTCCAGAGTCTCTTGCATGCTTGCCACACGAGTCTTGGCAGGTTCCACAGTCAGAGTTGGAAATTAGGAAAGATATTAGGGATTTGTGTCTGTTTACCATAGACCCTTCAACTGCTACTGATCTTGATGATGCCCTCTCAGTTGAAACTTTGCCCGGTGGGATCTATAGGGTTGGTGTTCACATTGCTGATGTGTCCTATTTTGTTCAACCAGACACAGCCTTGGATATGGAAGCTCGTGTTCGATCTACTAGTGTCTACATGATGCTACGTAAACTGCCAATGCTGCCTGCCTTGGTTTCTGAGAATTTGGGTTCTCTTAATCCGGGAGTGGACAGGCTTGCTTTTTCAATCTTTTGGGATATGAACTTGTCCGGGAAAATTTTAGATAGGTGGGTCGGCCGCACAGTCATTAAATCTTGTTGCAAGCTGTCTTACGAGCATGCACAAGATATAATCGATGGCCGGATAGATGAGCACAGCTTGAGTTCTGGTGGAGATGGCTTCCCCAAGTTGTATGGTAATTTTGATTGGCATGATGTTTTCCAATCTCTAAGAATTCTTCACAATGTATCTAAAGCATTGAAGGAAAAGAGATTCAAGGATGGGGCTCTACGACTTGAAAATGCCAAGGTTGCCTTCATATTGGATGAGTTTGGACTTCCATATGATAGTATGCTCTGTGAACGGAAAGACTCTAATTTCCTTGTTGAGGAGTTTATGCTTTTGGCAAATAGGACAGCTGCTGAGATTATATGTAGAGCTTTCCCGGATAGTGCTTTGTTGCGGAGGCATCCAGAACCTAACACACGAAAGCTGAGAGAGCTTGAAGCATTTTGCAGCAAGCATGGGTTAGAATTGGACACTTCTTCATCTGGTAGCTTCCATCAATCCCTGGAGAAGATCAGAGAGAAGCTGAAGGATGACTCTATTTTATATGACATACTTATCAACTATGCTACCAAGCCAATGCAACTGGCAAAGTATTTTTGCAGTGGAGACTTGAAGGTCGGTGAGGGTGATTGGGGTCATTATGCTCTGGCAGTTCCTCTGTACACTCATTTCACTTCACCATTACGGCGGTATCCTGATATATTGGTTCATCGAACATTAATGGCTGCTATAGAGGCAGAGCAGACATATTTAGGATATCGCACCCAAGTCAACAAAGGTAATCAGGTAGGCGATGCCAGATGTTTCACTGGGATGAATTTTGACAAATTTGCGGCTGATTCTGTGGAAGGACAGCAAGCCCTATCATCTTCTGCGTTGAAGCACCGGGTACCAGCCATGGAGATGCTCTCTGATATGGCTTCCTACTGCAATCAAAGGAAATTGGCAAGTAGGCATGTCAAGGATGCTATTGATAAACTCTATATGTGGGTGTTGCTAAAGAATAAAGAGATTTTGTTGTCAGAAGCAAGAGTGTTGGGTATAGGCCCAAGGTTCATGTCCTTATATGTCCAGAAGCTTGCGGTTGAGAGGCGTATATATTATGACGACATTGATGGCTTGATAGTGGAATGGCTTGAAGCTACATCCACACTTGTGCTCAGTTATGTACATAATAAGCGCGTCCAACGGAGAGGGAGCCCTGGTAAATTTAAGGCACTAGAAGAAGTGGCCCTGATTGGTAGTCCATGCAACTTGGATCCAGAAGTGACCCAAAATGGGGATTCTGGCAATCCAGGACACCATGATGGGGAGATCGACCCTGCTATGTTCCCCCTAACTATTCGTGTCCTGTCTACAATCCCCGTTGCACTCCATGCTGTTGGTGGGGATGAAGGACCTCTGGATATTGCTGCAAGGCTTTATGTGAGCTCTTATTTCAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11486.p1 GENE.R_Transcript_11486~~R_Transcript_11486.p1 ORF type:complete len:1087 (+),score=213.90,RNB|PF00773.15|4.4e-99 R_Transcript_11486:362-3622(+)
MGMIVVEQQPQSGSDVVDKKKKRRSSRRSKNSSPNVGICFLGSGGSIEVTAQHQQTSQSFQNCNITKNGSSSKQGTNKASNVAFNSLPTMHLNDNRATFEPNNSVKVFSKSCPLANTLEKSGRLDDENNFVPPYLVDGCSKQNRFDPHWPLDVVKEALQRGEVFQATLRVNAHNRLEAYCTIEGVATDILINGIPLQNRAVEGDVVAVKVDPPSLWSKMKGSAASANNTSPSDDCDPSCSIEITPETSKGKEKVDSELGYLPVTCSSKNADGFYDMNGTYSDGNIQELSGRMNYIHVNGHHHSGLDPSLEGCSHVENLIADSVEKLCQSVVSFSSKRPTGRVVAIIEPSPRRDTIVGFLNIKWWLSSREGCTKDNRTTNLRPVSNSDYIHLTPSDPKFPKMIVLVRSLPDALMKRLDDGDASVGSELVAARIDCWTEESFLPQACVIHTFGHGEEVEARIASILFENAISCSEFCPESLACLPHESWQVPQSELEIRKDIRDLCLFTIDPSTATDLDDALSVETLPGGIYRVGVHIADVSYFVQPDTALDMEARVRSTSVYMMLRKLPMLPALVSENLGSLNPGVDRLAFSIFWDMNLSGKILDRWVGRTVIKSCCKLSYEHAQDIIDGRIDEHSLSSGGDGFPKLYGNFDWHDVFQSLRILHNVSKALKEKRFKDGALRLENAKVAFILDEFGLPYDSMLCERKDSNFLVEEFMLLANRTAAEIICRAFPDSALLRRHPEPNTRKLRELEAFCSKHGLELDTSSSGSFHQSLEKIREKLKDDSILYDILINYATKPMQLAKYFCSGDLKVGEGDWGHYALAVPLYTHFTSPLRRYPDILVHRTLMAAIEAEQTYLGYRTQVNKGNQVGDARCFTGMNFDKFAADSVEGQQALSSSALKHRVPAMEMLSDMASYCNQRKLASRHVKDAIDKLYMWVLLKNKEILLSEARVLGIGPRFMSLYVQKLAVERRIYYDDIDGLIVEWLEATSTLVLSYVHNKRVQRRGSPGKFKALEEVALIGSPCNLDPEVTQNGDSGNPGHHDGEIDPAMFPLTIRVLSTIPVALHAVGGDEGPLDIAARLYVSSYFR*

Click here to download the sequence:
Link to NCBI Protein BLAST