Transcript Information: R_Transcript_114865.p1


Annotated TAIR IDAT2G40435.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16887048-16888407 | Forward length=158
E-Value1.8E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4635898221093
Replicate 22.3186098619225
Replicate 32.5295783848512
Condition 2: 8 Hour
Replicate 12.1030804249168
Replicate 21.2346499176115
Replicate 30.66815744614921
Condition 3: 24 Hour
Replicate 14.0845178503277
Replicate 22.5708583982881
Replicate 33.4912903181554


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_114865.p1 GENE.R_Transcript_114865~~R_Transcript_114865.p1 ORF type:complete len:163 (+),score=35.90 R_Transcript_114865:213-701(+)
ATGGTTTCCAAGGAGCACAAAATTAGAGCTGCTGCTCTGCATGAGAAGCTTCAACTTCTTGGTTCTATCACCAACTCTCATGCAGTGAATGAGAGCTCAATCATCGTGGATGCATCCAAGTACATAAAAGAGCTGAAAGAGAAGGTTGAAATGCTTAATCGAGATGTTCAAAGTTCAAGTGAATCATTACCCACGATCAAAGTAGAAACCCTAGAGAAAGATAAAGGATTCCTAATAAACGTATATAATTCAGACAAGAATTGCCCAGGTCTGCTGGTGTTTATACTAGAAGCTTTTGAAGACCTCAACCTTAATGTAGTCCAAGCTAGGGCTTCTTGTTCTCATAATTTCCAATTGGAAGCCATCATTGCTCAAGGTGAAGAAGAAGGTGGCGAAAATGTTGATTCACAAGCGATAAAGCAAGCTGTATTCCAGGCGATCAGGCATTGGAGTCAAACTACTACTACTACTGAACAGCAAGATCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_114865.p1 GENE.R_Transcript_114865~~R_Transcript_114865.p1 ORF type:complete len:163 (+),score=35.90 R_Transcript_114865:213-701(+)
MVSKEHKIRAAALHEKLQLLGSITNSHAVNESSIIVDASKYIKELKEKVEMLNRDVQSSSESLPTIKVETLEKDKGFLINVYNSDKNCPGLLVFILEAFEDLNLNVVQARASCSHNFQLEAIIAQGEEEGGENVDSQAIKQAVFQAIRHWSQTTTTTEQQDQ*

Click here to download the sequence:
Link to NCBI Protein BLAST