Transcript Information: R_Transcript_115023.p1


Annotated TAIR IDAT4G19010.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10411715-10414221 | Reverse length=566
E-Value2.8E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44211324111776
Replicate 20.50856090973732
Replicate 30.63409654245405
Condition 2: 8 Hour
Replicate 10.67780941030437
Replicate 20.4642397614087
Replicate 30.81650843621118
Condition 3: 24 Hour
Replicate 10.71494901401155
Replicate 20.45789464824728
Replicate 31.2875120404057


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115023.p1 GENE.R_Transcript_115023~~R_Transcript_115023.p1 ORF type:complete len:289 (+),score=50.68,AMP-binding|PF00501.24|2.5e-52 R_Transcript_115023:677-1543(+)
ATGATAAAGCAAGATGATACAGCAACAATAATGTATTCTTCAGGTACTACAGGTGCTAGTAAAGGTATAGTACTTACCCACAAGAACTTGATAGCAGTTGTGGAGCTTTTTGTTAGATTCGAAGCCTCACAATATAAAGAAAAAAGTTGGGAAAATGTTTACTTGGCTGTTTTGCCTATGTTCCATATATATGGGTTTGTTCTATTTGGTGTGGGTTTGCTGTCATTGGGCACTAGTATTGTTGTCATGAGGAAATTTGATATCAATGAGGTGGTGAAGGCAATTGAGTTTTATACGGTTACTCATTTTCCTGTTGTGCCACCTATATTGGCTGCATTAACTAGGAAAGCAAAAGGCCTTGGTGGTGAAAGTTGCTGGGGTAGCTTGAAGCAGGTTTGTTGTGGGGCTGCTCCTTCATCAAACAAAGTCATTGCAGATTTTTTGGATGCTTTTCCTCATGTTGATTTCATTCAGGGGTATGGAATGACTGAGTCAGCGGCAGTAGGAACTCGTGGATTCAATATAGGAAATTTGCACAAGTACAGCTCAGTAGGTCTCCTAGCTCCAAATATGGAAGCGAAAGTGTTGAATTGGAATACTGGTATGAGCATGCCGCCTGGAAAGGCTGGAGAGCTCTTGCTTCGCGGACCTGGTGTTATGAAAGGTAACTATAATGGAGTATACTGTTTGATATTAGATAATCTCATTATTTCCATCCTCAACAATTGTATGCAGGAAACAAAACTTCTTAATGGCAATATTGTAAGCCTACAGAAGTCTTTTTTGATTCACTTAGATATGCCATCTGCAGATTTGCTTCATCTAAATGATTTTGCTAGGTCAATCCTGTTACCTGTGGCTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115023.p1 GENE.R_Transcript_115023~~R_Transcript_115023.p1 ORF type:complete len:289 (+),score=50.68,AMP-binding|PF00501.24|2.5e-52 R_Transcript_115023:677-1543(+)
MIKQDDTATIMYSSGTTGASKGIVLTHKNLIAVVELFVRFEASQYKEKSWENVYLAVLPMFHIYGFVLFGVGLLSLGTSIVVMRKFDINEVVKAIEFYTVTHFPVVPPILAALTRKAKGLGGESCWGSLKQVCCGAAPSSNKVIADFLDAFPHVDFIQGYGMTESAAVGTRGFNIGNLHKYSSVGLLAPNMEAKVLNWNTGMSMPPGKAGELLLRGPGVMKGNYNGVYCLILDNLIISILNNCMQETKLLNGNIVSLQKSFLIHLDMPSADLLHLNDFARSILLPVAV*

Click here to download the sequence:
Link to NCBI Protein BLAST