Transcript Information: R_Transcript_115024.p1


Annotated TAIR IDAT4G19010.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10411715-10414221 | Reverse length=566
E-Value4.1E-178
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1322325404243
Replicate 20.55253422148153
Replicate 31.2917333230913
Condition 2: 8 Hour
Replicate 10.73641699089459
Replicate 20.46234906062602
Replicate 31.5695001664244
Condition 3: 24 Hour
Replicate 11.2514594165478
Replicate 20.62185880330575
Replicate 31.9336881960229


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115024.p1 GENE.R_Transcript_115024~~R_Transcript_115024.p1 ORF type:complete len:532 (+),score=82.08,AMP-binding|PF00501.24|1.3e-90 R_Transcript_115024:76-1671(+)
ATGGCACAAACTGTAATTTCTAGCAACCAACAGCAACATACCAGTTGCTCCTCTTGGTACTCCCAAGAAACAGGAATTTACAGTAGCAAACACCCAAACATTAAACTCCCAAATGATCCATTTCTTGATGTTGTTTCCCACATCTTTTCATACCCCAACAACAACAATGGTACTACTAACTCAGCTGCTGCCCTCATTGATGCCTCATCTGGGCATTCAATCCCTTACAATGACCTTTTTACCCTTGTTAAATCCACTGCCTTTGGCCTCCAACGAATGGGTATTTCTCAGGGTAATATGGTCTTGATTCTTTTGCCTAACTCAATATACTTTCCTATTCTTTCCCTGGGTGTTCTTTACTTGGGTGCAATTGTCACCCCTATGAACCCTCATTCAAGTTTCTCTGAGGTAAAACATCAAACATTTGGTAGTCATTTTACTATGGCCTTTTCCCTTGCTGAAAATGCGAGCAAGTTGAGATCTTTAGGCCTTAGGGTAATTGGAGTACCAGAGAATGTGAGTTTTGTAGAAAAAAGTTGTGTTTTTTCCGAGTTTTATAAGCTTGTTTTTGGTAATGCTGGAAATTCTGTTTCAAGGCCTATGATAAAGCAAGATGATACAGCAACAATAATGTATTCTTCAGGTACTACAGGTGCTAGTAAAGGTATAGTACTTACCCACAAGAACTTGATAGCAGTTGTGGAGCTTTTTGTTAGATTCGAAGCCTCACAATATAAAGAAAAAAGTTGGGAAAATGTTTACTTGGCTGTTTTGCCTATGTTCCATATATATGGGTTTGTTCTATTTGGTGTGGGTTTGCTGTCATTGGGCACTAGTATTGTTGTCATGAGGAAATTTGATATCAATGAGGTGGTGAAGGCAATTGAGTTTTATACGGTTACTCATTTTCCTGTTGTGCCACCTATATTGGCTGCATTAACTAGGAAAGCAAAAGGCCTTGGTGGTGAAAGTTGCTGGGGTAGCTTGAAGCAGGTTTGTTGTGGGGCTGCTCCTTCATCAAACAAAGTCATTGCAGATTTTTTGGATGCTTTTCCTCATGTTGATTTCATTCAGGGGTATGGAATGACTGAGTCAGCGGCAGTAGGAACTCGTGGATTCAATATAGGAAATTTGCACAAGTACAGCTCAGTAGGTCTCCTAGCTCCAAATATGGAAGCGAAAGTGTTGAATTGGAATACTGGTATGAGCATGCCGCCTGGAAAGGCTGGAGAGCTCTTGCTTCGCGGACCTGGTGTTATGAAAGAATATCTAAACAATAGAGAGGCAACAAGGCTAACAATTGAAGAGGATGGTTGGTTACACACTGGGGACATAGCATATTTCGACCATGATGGTTACTTATTCATACTTGATCGGTTGAAGGAGATCATCAAATACAAGGGTTTCCAGGTATATGTTGTTTGTACCCTCAGCTTTTTATACCCGTTGGTTTTCAGATGCTATTTTGAGTTCCTCGGATATCACATCTTATGTGTCTTTCGATACTTTCCCTTGAAGATTGCTCCGGCTGATCTAGAAGCTATTTTGATATCCCATCCACAAATACTTGACGTTGCAGTAACAGGGTATGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115024.p1 GENE.R_Transcript_115024~~R_Transcript_115024.p1 ORF type:complete len:532 (+),score=82.08,AMP-binding|PF00501.24|1.3e-90 R_Transcript_115024:76-1671(+)
MAQTVISSNQQQHTSCSSWYSQETGIYSSKHPNIKLPNDPFLDVVSHIFSYPNNNNGTTNSAAALIDASSGHSIPYNDLFTLVKSTAFGLQRMGISQGNMVLILLPNSIYFPILSLGVLYLGAIVTPMNPHSSFSEVKHQTFGSHFTMAFSLAENASKLRSLGLRVIGVPENVSFVEKSCVFSEFYKLVFGNAGNSVSRPMIKQDDTATIMYSSGTTGASKGIVLTHKNLIAVVELFVRFEASQYKEKSWENVYLAVLPMFHIYGFVLFGVGLLSLGTSIVVMRKFDINEVVKAIEFYTVTHFPVVPPILAALTRKAKGLGGESCWGSLKQVCCGAAPSSNKVIADFLDAFPHVDFIQGYGMTESAAVGTRGFNIGNLHKYSSVGLLAPNMEAKVLNWNTGMSMPPGKAGELLLRGPGVMKEYLNNREATRLTIEEDGWLHTGDIAYFDHDGYLFILDRLKEIIKYKGFQVYVVCTLSFLYPLVFRCYFEFLGYHILCVFRYFPLKIAPADLEAILISHPQILDVAVTGYV*

Click here to download the sequence:
Link to NCBI Protein BLAST