Transcript Information: R_Transcript_115176.p1


Annotated TAIR IDAT5G48890.1
Annotated Gene NameC2H2-like zinc finger protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19820353-19820874 | Forward length=173
E-Value6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 152.318647442402
Replicate 240.982083700261
Replicate 348.140897728812
Condition 2: 8 Hour
Replicate 129.592542663516
Replicate 232.046611408758
Replicate 329.508500687688
Condition 3: 24 Hour
Replicate 138.672242121534
Replicate 231.490663763551
Replicate 348.223178240651


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115176.p1 GENE.R_Transcript_115176~~R_Transcript_115176.p1 ORF type:complete len:187 (+),score=27.78 R_Transcript_115176:616-1176(+)
ATGATTCTTCAGAGTGAAGGATCAGATGACATACAATCCAACAAAGATCAAGCCCTTCAGACAACAAATGAAGGAAACACAGACAACGATATAGGGTGGCTACATCTGGGTTTAGGTACAAACACAACTTCCACAGATCAACACCCAGGTTCTCCTTCAAGACCAGTTCCGGCCAAGATTTTCTCATGCAACTTCTGTATGAGGAAGTTCTTCAGTTCTCAGGCTCTAGGGGGACACCAGAATGCACACAAGAGAGAAAGAGGTGCAGCAAGAAGATTCCAATCACAAAGAATGATGTCAATGATGGGTCTCCCTGTTAACTCATCAATGCCAAGGTCACTGGGTGTGCATCCCCATTCACTACTACATAAGCCCCACAGAGATGGTTACGTATTTGCTGCAAAGTTTAAAGATTCTAGTACTGGATTTAGTGCTCCTTGGAACCACTTCCCAATGGAGCACACAAAGGATGTGATGTGGCCAGGGAGTTATCGCTTGGATTCACAACTAGCTGGACAGCAGCCGGAGGAATCAAAGCTAGATCTAAACCTCCGTCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115176.p1 GENE.R_Transcript_115176~~R_Transcript_115176.p1 ORF type:complete len:187 (+),score=27.78 R_Transcript_115176:616-1176(+)
MILQSEGSDDIQSNKDQALQTTNEGNTDNDIGWLHLGLGTNTTSTDQHPGSPSRPVPAKIFSCNFCMRKFFSSQALGGHQNAHKRERGAARRFQSQRMMSMMGLPVNSSMPRSLGVHPHSLLHKPHRDGYVFAAKFKDSSTGFSAPWNHFPMEHTKDVMWPGSYRLDSQLAGQQPEESKLDLNLRL*

Click here to download the sequence:
Link to NCBI Protein BLAST