Transcript Information: R_Transcript_115235.p1


Annotated TAIR IDAT5G40820.1
Annotated Gene NameAtaxia telangiectasia-mutated and RAD3-related
Annotated Gene Symbol(s)ATRAD3, ATR, ATATR
Annotation TypeOrtholog
Chromosome Positionchr5:16343860-16353847 | Reverse length=2702
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.463972282023
Replicate 21.8820213258306
Replicate 32.8713627659043
Condition 2: 8 Hour
Replicate 12.3319871378329
Replicate 22.8812340747746
Replicate 33.6099841850069
Condition 3: 24 Hour
Replicate 13.9870701627945
Replicate 23.0117475375788
Replicate 34.0004838398321


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115235.p1 GENE.R_Transcript_115235~~R_Transcript_115235.p1 ORF type:5prime_partial len:1428 (+),score=269.17,FAT|PF02259.19|4.7e-51,PI3_PI4_kinase|PF00454.23|7.4e-50,FATC|PF02260.16|2.2e-12 R_Transcript_115235:1-4284(+)
AATCATGAGAACTTGAATGTGAGGTACATGGTCGTTTGTGAGCTCAGCAAACTACTTAACCTCAGAAAGGAGGATTTGGCAGCAGTGATTAACAATGAAACTGATGTAGATATCACTGTTTTAAGCTCGTTGATTACATCCTTATTAAGGGGATGTGCAGAAGAATCAAGGACTTCGGTTGGTCAAAGGCTTAAGATGGTATGCTCTGATTGTTTAGGAGCTTTAGGTGCAATAGATCCTGCCAAGGTAAAGGGATCGTCATGTCAAAGGTTCAAAATTCAGTGCTCAGATGATGATTTAATTTTTGAACTAATACATAAGCACCTCGCCAGGGCATTCAGAGCTGCGCCAGATACCAGTATCCAAGACTCTGCTGCACTGGCTATACAAGATTTGCTAGAAACTGCAGGCTGTAAAGCATATTTGGACGAGGATGCAGTTGGGTCCAAGGGCTCAAATGACTGTCAAGTGATAAGGGGTCAACGGTTGTGGGACCGTTTCTCTAATTATGTTAAGGAGATCATAGCACCATGCTTAAATTCTCGATTTCGACTTCAGAATGTGGCAGATTCTACATCTTCTGGGCCTATATATCGCCCATCCTTGTCCTTCAGAAGGTGGATCTCTCTTTGGATTAAAAAACTGATTGGGCATGCTACGGGAACTCGTGCAAGCATCTTCAATGCTTGTCGTGGTATTGTGCGTCATGATATGCAGACAGCAATATATCTGCTACCGTATTTAGTGCTTGATGTTGTTTGCCATGGAGCAGAGGCGGCACGATATGGTGTAACAGAGGAGATATTGTCTGTCCTCAATGCAGCTGCCTCAGAAAACAGTGGTGCAGCAGTTCATGCAATTGGTGGTGGGCAAAGTGAGGTCTGTATTCAGGCTGTATTTACCCTGCTTGATAATATGGGACAATGGGTTGATGATGTGGAACAGGAGATAGCACTTTCTCTTTCATCATTGTCGTCTAAACAGCCTTCCAAGTTTAGTAAAACAACTACAAACTCATCAACCGGTTCCGACCAACTCCTCACACAATGCAAATATGTTTCTGAGCTTTTGGATGCAATTCCAAAGGTGACATTAGCGAGGGCTTCATTTAGATGTCAGGCTTATGCTAGATCTTTGATGTACTTTGAGTCACATGTACGGGGAAAATCAGGTTCATTTAACCCAGCAGCTGAGAAGAGTGGCATCTTTGACGATGAAGACATCTCGTTCCTGATGGAAATATATAGTGGTCTGGATGAGCCGGATGGTTTATCAGGGTTGGCAAACTTACGGAAGTCAGTGAGCTTACACGACCAGCTTTTAATAAATAAGAAAGCTGGAAACTGGGCAGAGGTCTTGACTTCCTGCGAGCAGGCCTTGCAGATGGAGCCCATGTCTGTTCAGAGACATTCGGATGTTCTTAACTGCTTACTTAATATGTGCCATTTACAGGCGACAGTCACTCATGTTGATGGACTAATATCAAGGATTCCTCAATACAGGAAAACATGGTGCATGCAAGGAGTGCAGGCAGCGTGGAGGCTTGGCAGGTGGGACTTGATGGATGAGTACCTCAAAGGAGCTGACAAAGAAGGCTTGTTATGCAGCAGTTCTGAGAGTAACGCTTCATTTGAATTGGATGTCGCTAAGATCCTTCAGTCAATCATGAAAAAGGATCAGTTTGCAGTTGCTGAGAAAATTGCGTTGTCGAAGCAAGCTCTAATTGCTCCACTAGCTGCTGCGGGCATGGACTCTTATACACGGGCTTATCCTTTTGTAGTAAAGCTTCAGCTATTGAAAGAGCTGGAAGAATTTCATGATCTACTTGTGGGTGAATCATTCTTGGAAAAACCTTTTAATCTTGGAGATCCAATATTCAAGAAAGCTTTAGGGAATTGGGAAAACCGGCTGAGATATACGCAGCCGTCCCTTTGGGCGAGGGAGCCACTCTTAGCTTTCAGGAGACTTGTTTTTCATGCCAGTGGTCTGGGTGCGCAAGTTGGAGAATGCTGGCTTGAATATGCAAAACTCTGTCGCTCTGCTGGTCATTACGAGACTGCTAATCGAGCAATTCTTGAGGCAAAATCATCTGGTGCACCTAATGTCCACATTGAAAAGGCCAAGCTTCTGTGGAGCATGAAGCGATCTGAGGGTGCAATTGCTGAATTGCAGCAGTCTCTCTTAAACATGCCGCTGGAGGTTGTTGGATCTGCTGCAATATCATCTATTACTAGCCTTTCTTTGGTTCCACTGAATCCACAACCCATTCATCGTGATACTCAAGCGCTAAATGAAAATCTCAATATTGCAAAAACTCTACTTTTGTACTCAAGGTGGATCCATTATACAGGGCAGAAGCAGAAAGAAGATGTGATGAGTCTTTACTCTAGGGTGAGGGAATTGCAACCTAAGTGGGAGAAAGGGTACTTTTATGTTGCTAAATATTGTGATGAGGTACTAGCAGATGCTAGAAAACGTCAGGTGGAGCACATTGATACTAATCCAAAGATACCACCTGCTGTTGGTGCTGTCTCTAGTAATTTGACTAGTGAGAAGCCTTGGTGGGTTTATCTTCCTGAGGTTCTGTTATTTTATGCTAAAGGCCTTCACAGGGGTCACAAGAATCTTTTTCAAGCACTTCCAAGATTGTTGACCCTCTGGTTCGACTTTGGATGCGTATATCAGCAATGTGGTTCATCATTGAATAAAGATCTGAAGAGTGTCCATGTGAAGGTTATGAGTATAATGCGAGGATGTTTAAAGGATTTGCCTACTTACCAATGGCTAACTGTTCTACCACAGCTGGTCTCTAGAATATGCCACCAAAATGAAGAGATTGTTCGATTGGTAAAACACATAATAACCTCTGTGCTCCGGCAGTACCCTCAGCAAGCTTTATGGCTCATGGCAGCTGTGTCTAAATCCACTGTTCCTTCACGAAGACAAGCAGCTGCAGAGATCATGCAAGCAGCACGCAAGGGGTGCAGTTCACAAAATGGGCACAGTGATTTATTTGCGCAGTTTACCAGCCTAATTGATCATCTGATTAGGTTGTGCTTTCATGCAGGCCAACCTAAGGCAAGGACAATTAATATCTTGACTGAATTTAGTGCCCTGAAGAGAATGATGCCTCTAGGAATTATTATGCCCATACAGCAATCACTCAATGTTAAGTTGCCAACAAGTGCTTCAACTTCAGTGGATGCATCTGATATCTTTTCAGCTATTGATCTTCCAACAATATCAGGAATAGGTGATGAAGCTGATATTCTTTCATCTCTTCAGCGACCAAAAAAAGTTGTTCTTGTCGGAAGTGATGGTACTGAACGAGCATTCCTTTGTAAACCCAAAGACGATCTAAGGAAAGATGCCCGCATGATGGAATTCAATGCTATGATAAATCGTCTGCTGTCAAAATGTGCTGAAAGCCGTCGCAGGAAACTCTATATTCGCACTTTTGCTGTAATTCCTCTTACTGAGGATTGTGGCATGGTGGAATGGGTGCCTCACACTCGTGGTCTCCGACATATTCTTCAAGATATTTATATAACACGTGGAAAATTTGATAGACAGAAAACAAATCCTCAAATTAAACGGATTTATGATCAGTGCCAAGGGAAAATGCCAGAAGATGAAATGTTGAAGAGCAAAATTCTTCCAATGTTTCCCCCAGTTTTCCACAAGTGGTTTTTAACTACTTTCTCTGAGCCTGCTGCCTGGTTCAGAGCCAGGGTTGCATATGCACATACTACTGCAGTGTGGTCCATGGTGGGCCACATTGTAGGCCTTGGAGATCGGCATGGGGAAAACATCCTATTTGATTCTACTACTGGAGATTGCGTCCATGTTGATTTTAGTTGCTTGTTTGACAAAGGCTTACTGTTAGAAAAGCCTGAGCTTGTGCCTTTCCGGTTGACCCAGAACATGATTGATGGACTTGGAATTACTGGGCATGAGGGAGTATTCTTAAAGGTCTGTGAGATCACTCTTTCAGTTTTGAGGACCCACAGGGAGACTTTGATGAGTGTTCTTGAAACTTTCATCCATGATCCTCTTGTAGAGTGGACAAAATCTCACAAGTCAAGTGGGGTTGAAGTTGAGAACCCGCATGCACAGCGGGCCATCAGTAACATCGAAGCAAGGCTGCAAGGGATTGTTGTTGGGGTTGCAGCAGCACCATCTTTGCCTTTAGCTGTGGAGGGCCAAGCTCGTCGTTTGATAGCTGAAGCAGTTTCTCATAAGAATCTTGGCAAGATGTATATATGGTGGATGCCTTGGTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115235.p1 GENE.R_Transcript_115235~~R_Transcript_115235.p1 ORF type:5prime_partial len:1428 (+),score=269.17,FAT|PF02259.19|4.7e-51,PI3_PI4_kinase|PF00454.23|7.4e-50,FATC|PF02260.16|2.2e-12 R_Transcript_115235:1-4284(+)
NHENLNVRYMVVCELSKLLNLRKEDLAAVINNETDVDITVLSSLITSLLRGCAEESRTSVGQRLKMVCSDCLGALGAIDPAKVKGSSCQRFKIQCSDDDLIFELIHKHLARAFRAAPDTSIQDSAALAIQDLLETAGCKAYLDEDAVGSKGSNDCQVIRGQRLWDRFSNYVKEIIAPCLNSRFRLQNVADSTSSGPIYRPSLSFRRWISLWIKKLIGHATGTRASIFNACRGIVRHDMQTAIYLLPYLVLDVVCHGAEAARYGVTEEILSVLNAAASENSGAAVHAIGGGQSEVCIQAVFTLLDNMGQWVDDVEQEIALSLSSLSSKQPSKFSKTTTNSSTGSDQLLTQCKYVSELLDAIPKVTLARASFRCQAYARSLMYFESHVRGKSGSFNPAAEKSGIFDDEDISFLMEIYSGLDEPDGLSGLANLRKSVSLHDQLLINKKAGNWAEVLTSCEQALQMEPMSVQRHSDVLNCLLNMCHLQATVTHVDGLISRIPQYRKTWCMQGVQAAWRLGRWDLMDEYLKGADKEGLLCSSSESNASFELDVAKILQSIMKKDQFAVAEKIALSKQALIAPLAAAGMDSYTRAYPFVVKLQLLKELEEFHDLLVGESFLEKPFNLGDPIFKKALGNWENRLRYTQPSLWAREPLLAFRRLVFHASGLGAQVGECWLEYAKLCRSAGHYETANRAILEAKSSGAPNVHIEKAKLLWSMKRSEGAIAELQQSLLNMPLEVVGSAAISSITSLSLVPLNPQPIHRDTQALNENLNIAKTLLLYSRWIHYTGQKQKEDVMSLYSRVRELQPKWEKGYFYVAKYCDEVLADARKRQVEHIDTNPKIPPAVGAVSSNLTSEKPWWVYLPEVLLFYAKGLHRGHKNLFQALPRLLTLWFDFGCVYQQCGSSLNKDLKSVHVKVMSIMRGCLKDLPTYQWLTVLPQLVSRICHQNEEIVRLVKHIITSVLRQYPQQALWLMAAVSKSTVPSRRQAAAEIMQAARKGCSSQNGHSDLFAQFTSLIDHLIRLCFHAGQPKARTINILTEFSALKRMMPLGIIMPIQQSLNVKLPTSASTSVDASDIFSAIDLPTISGIGDEADILSSLQRPKKVVLVGSDGTERAFLCKPKDDLRKDARMMEFNAMINRLLSKCAESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRHILQDIYITRGKFDRQKTNPQIKRIYDQCQGKMPEDEMLKSKILPMFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLLLEKPELVPFRLTQNMIDGLGITGHEGVFLKVCEITLSVLRTHRETLMSVLETFIHDPLVEWTKSHKSSGVEVENPHAQRAISNIEARLQGIVVGVAAAPSLPLAVEGQARRLIAEAVSHKNLGKMYIWWMPWF*

Click here to download the sequence:
Link to NCBI Protein BLAST