Transcript Information: R_Transcript_115296.p1


Annotated TAIR IDAT4G05220.1
Annotated Gene NameLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:2685104-2685784 | Reverse length=226
E-Value2.4E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5434453789362
Replicate 23.7001676963148
Replicate 33.1919224519229
Condition 2: 8 Hour
Replicate 12.4084457325159
Replicate 22.1077880424068
Replicate 33.4964167998286
Condition 3: 24 Hour
Replicate 12.6345024687529
Replicate 23.8867874274378
Replicate 34.9337039253252


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115296.p1 GENE.R_Transcript_115296~~R_Transcript_115296.p1 ORF type:complete len:244 (+),score=10.76,LEA_2|PF03168.9|3e-11 R_Transcript_115296:37-732(+)
ATGAACCACCCCTACAACCTCCCCGTCCACCGCGTGAACAACGGCCACCAGCCATACTATGGGCGGCACCACTCGGTCCGATACTTTGCCCACCGTGTCAAGGAGAGCCTAACTACTAGGGTCTCTAAGTTCATATGCACCATCTTCTTATTCATCTTCTTCGTTGTGGGCTTGATTGCCTTCATTCTGTGGCTTAATTTTCGTCCTCACCGGCCCAGGTTCCACCTTGAGGAATTCTCTATGCCTTCCTTGGCCCAGCCCACTCTTCCACCTGAAGGACCTGTGATTTTGTTCAATGTTAGCATCCGCAATTCAAACCAAAAGGTGAGAGTCCATTACGATTCCATAGAGTGTGCAGTATACTACAGGGAAAACCCAATTGGTGGGTCACCACTAGTGACAGAGTCCTTCGATCAAGACACCAAAAACACAACCATTCTTTACAAGCAGTTGAGCGGACCCACTTTAACGGTGAATAATCAACATTGGACCGACATGCAAAGAGATCGTCAAACTGGGAGTGTACCATTTAGGCTGGAGATTACTTCTGTAATTAAGTTTCATATATTTTCACATGTTTTCTCAAAGGATACCAAGAAACATAAAATGCATGTTAAATGTCCTGCTGTTGTCGACCCAAATGGTTTGCTTTTGCCTGGTTATAACCTTAAGAGATGCGATATGTATTTCACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115296.p1 GENE.R_Transcript_115296~~R_Transcript_115296.p1 ORF type:complete len:244 (+),score=10.76,LEA_2|PF03168.9|3e-11 R_Transcript_115296:37-732(+)
MNHPYNLPVHRVNNGHQPYYGRHHSVRYFAHRVKESLTTRVSKFICTIFLFIFFVVGLIAFILWLNFRPHRPRFHLEEFSMPSLAQPTLPPEGPVILFNVSIRNSNQKVRVHYDSIECAVYYRENPIGGSPLVTESFDQDTKNTTILYKQLSGPTLTVNNQHWTDMQRDRQTGSVPFRLEITSVIKFHIFSHVFSKDTKKHKMHVKCPAVVDPNGLLLPGYNLKRCDMYFT*

Click here to download the sequence:
Link to NCBI Protein BLAST