Transcript Information: R_Transcript_115331.p1


Annotated TAIR IDAT5G48910.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)LPA66
Annotation TypeHomolog
Chromosome Positionchr5:19832969-19834909 | Reverse length=646
E-Value9E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.077891393418
Replicate 24.8938745331221
Replicate 38.2670932677843
Condition 2: 8 Hour
Replicate 17.1800656612223
Replicate 27.9019657634265
Replicate 38.4616530711578
Condition 3: 24 Hour
Replicate 16.7319885855674
Replicate 25.9698445117352
Replicate 38.228460408608


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115331.p1 GENE.R_Transcript_115331~~R_Transcript_115331.p1 ORF type:5prime_partial len:133 (-),score=24.43,PPR|PF01535.16|6.3e+03,PPR|PF01535.16|6.3e-07,PPR|PF01535.16|89,PPR_2|PF13041.2|4.9e-05,PPR_2|PF13041.2|5.5e+02 R_Transcript_115331:7-405(-)
GACCACCGGTTCCACCACCACCACGAGGGCACGAAGCATCCTTCTCTCACCACGTCAGGTACTTCTCTCTCCTCTCTCTCTGTTCTCTTTTCTATTCTCTCTCAATCTCGCTGTTCTCTTTCTCTCCTTGTCGCTGGACTCTCGGTCTTCTCTTTCTCTCTCCTTGCTGTTCTCTTACTCTCTCGGTCTCTCCTGGTGATGATGGATTTAGGGGAAATGGAGCTGTGGGTGTTGATGGGCTTAGGAAAAGGAGACAAGATGATGTGGTTTTATTGGAATGTTATGGTTGATGGGTACTTGAAACTTGGAAACCTGAAAGCTGCACGTGAACTGTTTGATAAAATGCCCCAGAGAAGTGCTGTTTCTTGGAATGGAATGATAAATTTATTAATACTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115331.p1 GENE.R_Transcript_115331~~R_Transcript_115331.p1 ORF type:5prime_partial len:133 (-),score=24.43,PPR|PF01535.16|6.3e+03,PPR|PF01535.16|6.3e-07,PPR|PF01535.16|89,PPR_2|PF13041.2|4.9e-05,PPR_2|PF13041.2|5.5e+02 R_Transcript_115331:7-405(-)
DHRFHHHHEGTKHPSLTTSGTSLSSLSVLFSILSQSRCSLSLLVAGLSVFSFSLLAVLLLSRSLLVMMDLGEMELWVLMGLGKGDKMMWFYWNVMVDGYLKLGNLKAARELFDKMPQRSAVSWNGMINLLIL*

Click here to download the sequence:
Link to NCBI Protein BLAST