Transcript Information: R_Transcript_115439.p1


Annotated TAIR IDAT1G78170.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29414160-29414941 | Forward length=221
E-Value3.6E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.43742292533954
Replicate 30
Condition 2: 8 Hour
Replicate 10.30607331184057
Replicate 20
Replicate 30.30252684367312
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.36479507811495


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115439.p1 GENE.R_Transcript_115439~~R_Transcript_115439.p1 ORF type:complete len:240 (+),score=33.80 R_Transcript_115439:32-721(+)
ATGGTCTCATTTCAAACACCTTTCTCTGAGCTGAACCAACGAAAGACGATTTCTGTTTTTGAGACAACCTCCAAGAAAAGAAAATGGGACGACACTGAAGCTGAGGAGATTCTCCCTTGCAAGCAATGGAAGAATCCCAAGGCGAGTGCCAGTGCTACCGCCACCGCCAATTCTTTCTCTGATATCGAACTCCACCTCGAGACTCCTTTGCCATCTGAGTGGCAACGTTGCCTCGATATTCAGTCTGGGGAAATACACTTCTACAACACGAGAACGCAGAAAAGAACACTGAAAGACCCAAGGACAAGCCCAGAACCATCAAGCCCTAGGGATTGTCACATGAGCTTGGACCTTGAGCTTAACCTGCCTTGTGGCTCACTCAACAATAATTCTTCATTAACGTCACAGAAATCCGCTACTTTAATAAAGAAGAAATCCAGTAACTCACCACCACCATCGGCTTCTTCTGATGATCTCGTCATGAGTCTGAGCACCATCCGAAACAAGAGCTCTAGCAACAACGAAGCAGTTGATCAGGCCGTGGAGATGGTGGCAACCGCCTGTATGCGGTGCCACATGTTGGTGATGCTCTGCAAGTCCTCTCCAACATGCCCCAACTGCAAATTCACACACCCACCACATCAGAGTCCTCCTGACCTGTTCAAGCCAAGACTTAGCCTCTCTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115439.p1 GENE.R_Transcript_115439~~R_Transcript_115439.p1 ORF type:complete len:240 (+),score=33.80 R_Transcript_115439:32-721(+)
MVSFQTPFSELNQRKTISVFETTSKKRKWDDTEAEEILPCKQWKNPKASASATATANSFSDIELHLETPLPSEWQRCLDIQSGEIHFYNTRTQKRTLKDPRTSPEPSSPRDCHMSLDLELNLPCGSLNNNSSLTSQKSATLIKKKSSNSPPPSASSDDLVMSLSTIRNKSSSNNEAVDQAVEMVATACMRCHMLVMLCKSSPTCPNCKFTHPPHQSPPDLFKPRLSLSC*

Click here to download the sequence:
Link to NCBI Protein BLAST