Transcript Information: R_Transcript_115523.p1


Annotated TAIR IDAT4G02075.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)PIT1
Annotation TypeOrtholog
Chromosome Positionchr4:913555-916414 | Reverse length=218
E-Value6.8E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1975169753231
Replicate 25.6641182518386
Replicate 36.818749796064
Condition 2: 8 Hour
Replicate 19.6804582349574
Replicate 217.368684965014
Replicate 318.151610620387
Condition 3: 24 Hour
Replicate 17.367854412612
Replicate 24.7187995765886
Replicate 36.0063933791951


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115523.p1 GENE.R_Transcript_115523~~R_Transcript_115523.p1 ORF type:complete len:215 (+),score=28.16,DUF3675|PF12428.4|2.3e-24,RINGv|PF12906.3|1.4e-12 R_Transcript_115523:157-801(+)
ATGATGGGAGAAATTATATTATCTTTAGATGATTTACAAAAGGTTTCATACTGTAGAATTTGCCATGAAGCTGAATTTGAAAGCTGCAAGAAATTAGAAACTCCTTGTGCTTGTTCTGGAACTGTCAAGTATGCTCATAGAGATTGCATTCAAAGATGGTGTGATGAAAAAGGGAACACAGTTTGTGAACTTTGTTTACAGAAATATGAAACAGGGTACACAGCGATTCCTAAACAGCCCAAGAAAATAGTGGTACTAGATGAAGTTGTAAGCATCAGGGAAAGCTTGGAAATTCCAAGAACAACACATGAATTTCAAAATTCAGAATTACTAGCCATGGCTGAATGCTCATCATCAGCAGATAGAAGTGCTGCTTGTTGCAGAACTCTGGCTCTAATTTTTACAGTTCTGTTGTTGGGGAAACACCTCTTTGATGTGCTAAAAGGTGGAGCAGAACCTTACCCCTTCTCACTTGTAACGGTACTACTTCTAAGGACTTGTGGAATTGTAGTTCCTATGGTCATAATAATTAGGACAATATCTGCACTCCAAAATAGCATCAGACGACATCGGAATTTTCATGACTCACTAATTCGGCATGCCAACAACAGAGATGATAGAAATCAGGAGCAGAATACATCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115523.p1 GENE.R_Transcript_115523~~R_Transcript_115523.p1 ORF type:complete len:215 (+),score=28.16,DUF3675|PF12428.4|2.3e-24,RINGv|PF12906.3|1.4e-12 R_Transcript_115523:157-801(+)
MMGEIILSLDDLQKVSYCRICHEAEFESCKKLETPCACSGTVKYAHRDCIQRWCDEKGNTVCELCLQKYETGYTAIPKQPKKIVVLDEVVSIRESLEIPRTTHEFQNSELLAMAECSSSADRSAACCRTLALIFTVLLLGKHLFDVLKGGAEPYPFSLVTVLLLRTCGIVVPMVIIIRTISALQNSIRRHRNFHDSLIRHANNRDDRNQEQNTS*

Click here to download the sequence:
Link to NCBI Protein BLAST