Transcript Information: R_Transcript_115567.p1


Annotated TAIR IDAT5G06620.1
Annotated Gene NameSET domain protein 38
Annotated Gene Symbol(s)ATXR4, SDG38
Annotation TypeOrtholog
Chromosome Positionchr5:2033780-2036143 | Forward length=325
E-Value4.7E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.058604268088
Replicate 23.0643249256219
Replicate 34.2098869095632
Condition 2: 8 Hour
Replicate 13.0441886150629
Replicate 24.7139156313851
Replicate 33.7284389382416
Condition 3: 24 Hour
Replicate 14.5915614455408
Replicate 22.6227875437443
Replicate 34.6141647718324


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115567.p1 GENE.R_Transcript_115567~~R_Transcript_115567.p1 ORF type:5prime_partial len:185 (+),score=42.43,SET|PF00856.24|1.7e-10 R_Transcript_115567:2-556(+)
AATCAGGGTTTGAAGTATCCACTTCTGGTGAAAAGATTGGCTTGCATGGTGATATCTGAAGCAGCATCTGCCGACTGCATTGACATTCTTCAACCTGCTCCTATGTTGCCTGAGATGGAAGAGGAATATAGCTTGCTAAGGAGTACTTTAGAGGCTATAAATGTGAAGCATGAAAATATGAAGTTTTTAACAAAGCAATGGTATGCCAATGTGTTGGCTCGGGTTCGTATCAATGCATTTCGGATTGAAATTGTTTCTTGGTCGTATGAAGATCTTCTTTTATCTGCAGCAGCATCAGTTGAAGCTGAAGCAGGAGTAGGCAATGCTGTTTATATTCTTCCTTCTTTCTATAATCACGATTGCGATCCCAATGTGCATATTATATGGATTGACAATGTTCATGCAAGGCTAAAAGCACTCCGTGATGTTGATGAAGGTGAAGAGCTTTGTATATGTTACATTGATGCAAGTATGGATCATGAAGCTAGACAAAATGTCCTTCTGAGAGGATTTGGTTTCAAGTGCTCATGTCATCGCTGCTTGTCAGGTGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115567.p1 GENE.R_Transcript_115567~~R_Transcript_115567.p1 ORF type:5prime_partial len:185 (+),score=42.43,SET|PF00856.24|1.7e-10 R_Transcript_115567:2-556(+)
NQGLKYPLLVKRLACMVISEAASADCIDILQPAPMLPEMEEEYSLLRSTLEAINVKHENMKFLTKQWYANVLARVRINAFRIEIVSWSYEDLLLSAAASVEAEAGVGNAVYILPSFYNHDCDPNVHIIWIDNVHARLKALRDVDEGEELCICYIDASMDHEARQNVLLRGFGFKCSCHRCLSGD*

Click here to download the sequence:
Link to NCBI Protein BLAST