Transcript Information: R_Transcript_115599.p1


Annotated TAIR IDAT1G73820.1
Annotated Gene NameSsu72-like family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27755740-27757158 | Reverse length=193
E-Value5E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2110969353842
Replicate 21.0945938605653
Replicate 31.6284410613378
Condition 2: 8 Hour
Replicate 11.2765142863493
Replicate 22.2254906097862
Replicate 33.0109306716282
Condition 3: 24 Hour
Replicate 11.1968525095012
Replicate 21.0452729332027
Replicate 31.6597311610917


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115599.p1 GENE.R_Transcript_115599~~R_Transcript_115599.p1 ORF type:complete len:211 (+),score=37.21,Ssu72|PF04722.9|7.9e-72 R_Transcript_115599:378-1010(+)
ATGAAGCTGAGATATGCAATGGTGTGTTCATCAAACCAGAACAGGAGTATGGAAGCTCATTGTTTGTTAAAAAGACAAGGGTTTGATGTCTCATCCTATGGTACTGGAGCCCATGTTAAACTTCCTGGACCTTCCATTAGAGAACCCAATATTTATGAGTTTGGTACTCCTTATAAGCACATGTTTGAGGAACTTCGTCGCAAGGACCCGGAATTATACAAGCGTAATGGCATATTGCCGATGCTGAAGCGGAATTTATCCGTCAAGCTTGCACCTCAACGTTGGCAAGACAATGCCCTTGATGGCACCTTTGATGTGGTATTCACATTTGAAGAAAAGGTCTTTGATATGGTTGTTGAAGATCTTAATAATCGTGATCAAGTGCTCATGAAACCTGTTCTTATCATCAATCTTGAGGTAAAAGATAACCATGAGGAGGCAGCTGTTGGTGGTCGCCTTACCTTAGATTTATGTCAGGAAGTCTGCATCTTTCTAATTCTGTTTATTTTTTCAGTGAATCTTTCCACCCTTTTTCTTAAGCATGATCCCTTGTATCATTCTCTTTACAAAAATTCGGGGAAAAGGTCCTATGCACTGGGATGGGTGGATAGCAAAACTATGATTGATTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115599.p1 GENE.R_Transcript_115599~~R_Transcript_115599.p1 ORF type:complete len:211 (+),score=37.21,Ssu72|PF04722.9|7.9e-72 R_Transcript_115599:378-1010(+)
MKLRYAMVCSSNQNRSMEAHCLLKRQGFDVSSYGTGAHVKLPGPSIREPNIYEFGTPYKHMFEELRRKDPELYKRNGILPMLKRNLSVKLAPQRWQDNALDGTFDVVFTFEEKVFDMVVEDLNNRDQVLMKPVLIINLEVKDNHEEAAVGGRLTLDLCQEVCIFLILFIFSVNLSTLFLKHDPLYHSLYKNSGKRSYALGWVDSKTMIDS*

Click here to download the sequence:
Link to NCBI Protein BLAST