Transcript Information: R_Transcript_115673.p1


Annotated TAIR IDAT5G57560.1
Annotated Gene NameXyloglucan endotransglucosylase/hydrolase family protein
Annotated Gene Symbol(s)TCH4, XTH22
Annotation TypeOrtholog
Chromosome Positionchr5:23307296-23308235 | Reverse length=284
E-Value7.4E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1264804773594
Replicate 211.391609800332
Replicate 39.8693922621721
Condition 2: 8 Hour
Replicate 12.6048792497069
Replicate 21.0704677477163
Replicate 30.57930672192724
Condition 3: 24 Hour
Replicate 13.9077118685454
Replicate 210.441053410965
Replicate 34.7733824051212


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115673.p1 GENE.R_Transcript_115673~~R_Transcript_115673.p1 ORF type:5prime_partial len:188 (+),score=37.27,Glyco_hydro_16|PF00722.17|1.2e-34,XET_C|PF06955.8|1.2e-19 R_Transcript_115673:3-566(+)
AGTGGCCAACCTTACACTCTACACACCAATGTGTATAGCCAAGGGAAAGGTAACCGCGAGCAGCAATTCTACTTGTGGTTCGACCCAACTGAAGATTTTCATAGCTACTCAATTTTATGGACTCCTTTAAGAATTGTGTTCTTTGTGGATGGGATAGCAATTAGGGAATTTAAGAACATGGAAAAAATTGGTGTGCCTTTCCCAAGTAAGCAGCCCATGAGGATATTTTCAAGCTTGTGGAATGCTGATGATTGGGCCACACAAGGAGGAAGGGTTCATACAGATTGGTCTAAGGAACCTTTTGTTGCTTCTTATAGGAACTTTAGTGCTTGTGCTTGTGTATGGTCATCTGGGTCCTCTTCTTGTGGGTCGGATCCTCTTCATTCGGGTCCTGAGAATGCTTGGTTGAAGGAGGAGCTGGACTCCAAGAGCTTACAGAAGATCAAATGGGTGCAGGAGAACTACATGACTTACAATTATTGTAATGATAAATGGAGATTTCCTGAAGGACTCCCTAAAGAATGCACAGTAAAGAAGCCCAACAGAAGAAGGCAACGTCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115673.p1 GENE.R_Transcript_115673~~R_Transcript_115673.p1 ORF type:5prime_partial len:188 (+),score=37.27,Glyco_hydro_16|PF00722.17|1.2e-34,XET_C|PF06955.8|1.2e-19 R_Transcript_115673:3-566(+)
SGQPYTLHTNVYSQGKGNREQQFYLWFDPTEDFHSYSILWTPLRIVFFVDGIAIREFKNMEKIGVPFPSKQPMRIFSSLWNADDWATQGGRVHTDWSKEPFVASYRNFSACACVWSSGSSSCGSDPLHSGPENAWLKEELDSKSLQKIKWVQENYMTYNYCNDKWRFPEGLPKECTVKKPNRRRQRR*

Click here to download the sequence:
Link to NCBI Protein BLAST