Transcript Information: R_Transcript_115729.p2


Annotated TAIR IDAT1G01350.1
Annotated Gene NameZinc finger (CCCH-type/C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:136732-137970 | Forward length=343
E-Value3E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4971063221771
Replicate 25.3251486563075
Replicate 34.1497713036508
Condition 2: 8 Hour
Replicate 14.7907127070697
Replicate 26.9675211534129
Replicate 34.4721359499504
Condition 3: 24 Hour
Replicate 16.4880759556555
Replicate 25.1142629311484
Replicate 35.3926228938733


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115729.p2 GENE.R_Transcript_115729~~R_Transcript_115729.p2 ORF type:complete len:138 (+),score=35.63,zf-C3HC4_3|PF13920.2|1.4e-09,zf-RING_5|PF14634.2|3.3e-06,zf-C3HC4|PF00097.21|1.3e-05 R_Transcript_115729:867-1280(+)
ATGCATGATCGAGGCGATTATAAGTCTGGATGGCAGATGGAGAAAGAATGGGAGGAAGTTGAGAAGGCAAGGAAGAGAAGTTTGGCGATGGGTGGTGGTGACAATGATGAGGATGGGGCCGAGCAAGGTGATGATGATGATGATTCCCTGTCCTTTGCTTGCTTCATTTGTAGAGAGCCGTTTGTTGATCCAGTTGTGACCAAGTGCAAGCATTACTTCTGTGAGCATTGTGCTTTGAAGCATCACGCCAGGAATAAAAAGTGCTTTGTTTGCAATCAGCCTACCCTTGGAATCTTTAGTACGGCATGGCAGAAGAGAAACGATGAAGGGTTTGTTCACATTGTTGCCCTGTCCCTCTACATTCTGTATTTTAGTCGTATATTTCTGGAAGCTTCACTGCCATTTTTTCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115729.p2 GENE.R_Transcript_115729~~R_Transcript_115729.p2 ORF type:complete len:138 (+),score=35.63,zf-C3HC4_3|PF13920.2|1.4e-09,zf-RING_5|PF14634.2|3.3e-06,zf-C3HC4|PF00097.21|1.3e-05 R_Transcript_115729:867-1280(+)
MHDRGDYKSGWQMEKEWEEVEKARKRSLAMGGGDNDEDGAEQGDDDDDSLSFACFICREPFVDPVVTKCKHYFCEHCALKHHARNKKCFVCNQPTLGIFSTAWQKRNDEGFVHIVALSLYILYFSRIFLEASLPFFQ*

Click here to download the sequence:
Link to NCBI Protein BLAST