Transcript Information: R_Transcript_115741.p1


Annotated TAIR IDAT3G18660.2
Annotated Gene Nameplant glycogenin-like starch initiation protein 1
Annotated Gene Symbol(s)PGSIP1, GUX1
Annotation TypeOrtholog
Chromosome Positionchr3:6419211-6421959 | Reverse length=659
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1033788192779
Replicate 23.0273735483965
Replicate 33.764518116577
Condition 2: 8 Hour
Replicate 12.1259045535593
Replicate 23.0507869798827
Replicate 33.517753996199
Condition 3: 24 Hour
Replicate 14.9474964413192
Replicate 22.8723127857496
Replicate 33.1898360318889


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115741.p1 GENE.R_Transcript_115741~~R_Transcript_115741.p1 ORF type:complete len:645 (+),score=90.58,Glyco_transf_8|PF01501.16|3.7e+02,Glyco_transf_8|PF01501.16|1e-10 R_Transcript_115741:216-2150(+)
ATGGGTTCTTTTTCCAGTCCAAATGAGACTAGACAAAGATCTTATGTATCAATTGAAGAAATCTACAAAAGAAAGTTGCAGAGAAGCAAAGTTAAAGATGCAGAGAAACCAGCTCACATATCCAGCCAAGATAATAAGGGTGCAAAAAGCAAGTTTTCACTCTTGAAACTTGTCCTTCTCATCATTGTTTCTGCCGCTTTTATCACCTTATTATTCCTTCACTCCCCCGTTATCTGTAGTCACCACCATTTCTCTTCCCACTATACATCTCGGCCAAATATAATGAAAAGTTGGATATGGGGCAATACTGACCCAAGATACATATCAAATTTACAAATAAACTGGGATGAAATCTCAAAAGTGCTTGACAATTTAAAGGAGAAAGAGTACCATGCAATTGGCCTCTTGAACTTGAACAAAGATGAAACCAAGTTATGGAACCAGATGATTCCTGATGCCGAGCACACTGTACTGCACCTAGACTCTGCCGAAGAAAACATCACTTGGGAGTCCTTATACCCTGAATGGATCGACGAGGAGGAAGAAGAAGATGTACCTGTTTGCCCATCTTTGCCAAAGCTCGAACCACCAAGAAAAAGGCTCGACTTAATCATCGTTAAGCTGCCTTGTCAGACCGATAAGGCAAACTGGTCAAGGGATGTGGCTCGGTTGCACCTGCAGCTCGCAGCTGCAGGACTCGCAACCTCAGCCAAGGGGAATTACCCTGTTCACTTGCTTTTCATTACTAACTGTTTTCCGGCACCAAACTTGTTCCCTTGTAAGGAGCTTGTAAAGCATGAAGGAAATGCATGGTTGTATAAGCCGAACTTGAATTTATTAAGAGAGAAACTCCAGCTCCCTGTAGGCTCTTGTAAACTTGCCCTACCTCTCAAGGACAAAGATAGATCATACAGGGGAAATCCAAGAAGGGAGGCATATGCAACAATCCTGCACTCAGCTCATGTCTATGTATGTGGAGCCATAGCAGCAGCTCAGAGTATTCGAATGGTGGGGTCCACTCGGGACCTGGTAATCCTAGTCGATGAGACGATTAGCAGCTACCATAGGAGTGGCCTTGAAGCAGCAGGGTGGAAAATCCGAACCATTCAGAGAATAAGGAACCCAAAGGCAGAGAAAGATGCCTATAATGAATGGAATTACAGCAAGTTCCGGTTATGGCAGTTAACTGACTACGACAAGATCATATTCATTGATGCTGACCTCCTCATCCTAAGGAACATCGATTTCCTCTTCAGCATGCCAGAGATCTCAGCCACAGGAAACAATGCAACTCTCTTCAACTCCGGAGTTATGGTCATTGAGCCCTCAAATTGCACGTTTCAGCTTCTAATGCATCACATCAATGAAATAGAGTCATACAATGGAGGTGACCAAGGATACCTTAATGAAATATTCACATGGTGGCATAGAATCCCAAGGCATATGAACTTCTTAAAGCATTTTTGGGTTGGTGATGAGGAAGAGAAGAAGCAAATGAAGACTAGGCTATTTGGGGCTGAGCCTCCTGTACTATATGTCCTGCATTACTTAGGAATCAAGCCGTGGTTATGCTACAGGGACTATGACTGTAATTGGAACGTCGATTTCTTACAGGAGTTTGCGAGTGATGTTGCACATGCTCGGTGGTGGAGAGTCCACGATGCCATGCCAGAACAGTTGCAACCGTTCTGTCTGCTGAGATCGAAGCAGAAGGCACAGATAGAATGGGACAGGAGGCAGGCAGAGAAGGCAAATTACAGTGATGAGCATTGGAAAATCAGGGTTCAGGATAAGAGGATGAAGAAGTGTATTGACAAGTTGTGTAACTGGAAGAGTATGTTGAGGCATTGGGGTGAGACAAATTGGACCAACGATGAATCCTACACTCCTTCTCCACCTTCGATTAAGGTCACTTCTCTAAATTCTTTACAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115741.p1 GENE.R_Transcript_115741~~R_Transcript_115741.p1 ORF type:complete len:645 (+),score=90.58,Glyco_transf_8|PF01501.16|3.7e+02,Glyco_transf_8|PF01501.16|1e-10 R_Transcript_115741:216-2150(+)
MGSFSSPNETRQRSYVSIEEIYKRKLQRSKVKDAEKPAHISSQDNKGAKSKFSLLKLVLLIIVSAAFITLLFLHSPVICSHHHFSSHYTSRPNIMKSWIWGNTDPRYISNLQINWDEISKVLDNLKEKEYHAIGLLNLNKDETKLWNQMIPDAEHTVLHLDSAEENITWESLYPEWIDEEEEEDVPVCPSLPKLEPPRKRLDLIIVKLPCQTDKANWSRDVARLHLQLAAAGLATSAKGNYPVHLLFITNCFPAPNLFPCKELVKHEGNAWLYKPNLNLLREKLQLPVGSCKLALPLKDKDRSYRGNPRREAYATILHSAHVYVCGAIAAAQSIRMVGSTRDLVILVDETISSYHRSGLEAAGWKIRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFSMPEISATGNNATLFNSGVMVIEPSNCTFQLLMHHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWVGDEEEKKQMKTRLFGAEPPVLYVLHYLGIKPWLCYRDYDCNWNVDFLQEFASDVAHARWWRVHDAMPEQLQPFCLLRSKQKAQIEWDRRQAEKANYSDEHWKIRVQDKRMKKCIDKLCNWKSMLRHWGETNWTNDESYTPSPPSIKVTSLNSLQ*

Click here to download the sequence:
Link to NCBI Protein BLAST