Transcript Information: R_Transcript_115775.p1


Annotated TAIR IDAT3G25690.1
Annotated Gene NameHydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)CHUP1
Annotation TypeOrtholog
Chromosome Positionchr3:9354061-9357757 | Forward length=1004
E-Value4.7E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5569872629708
Replicate 23.2840367317799
Replicate 32.1732033104042
Condition 2: 8 Hour
Replicate 13.515919069348
Replicate 23.2107932900164
Replicate 31.9547888360417
Condition 3: 24 Hour
Replicate 16.4752789616601
Replicate 23.7889803735094
Replicate 39.0356934733089


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115775.p1 GENE.R_Transcript_115775~~R_Transcript_115775.p1 ORF type:complete len:390 (+),score=114.86,Hydrophob_seed|PF14547.2|3.5e-24 R_Transcript_115775:375-1544(+)
ATGGGGGGTTCAAAGCTTATAGCCATGTTGTTCATCTACATGATTTGCATGGTTATGTCATTGCCGCCTATATATGCTTGTGGTTATTGTGGCAAGCCTCACCCACCTTACGGCCGACCTTCTCCACCAACTTATCGCCCACCACCCCATCATGGTGGTGGAGGACATGGAGGCATGGGTCCACCAAAACATGAAGGTGGAGGACATGGAAGCAAGGGCCCACCAGAACATGGAGGTGGAGGACATGGAGGTAAACACCCACCACACCATGGTGGTGCCCCTAAAGTGTCACCACCAATTATCATGCCACCCATCATTGTTCCGGCTCCTCCGGTAATAACACCTCCTCCAGTGATAATTACTCCTCCATCTGTCCCATGCCCTCCAACTTATGGTCGACCTGGTCCACCTGGTAGTAGTGGTCCTCCAGGTACCCCTGGCACTCCTGGATCGCCTGGTACTCCCGGAGCACCCGGCACTCCAGGCGCTCCTGGGGCTCCAGGCGCTCCTGGGGCTCCAGGCACTCCTGGTGCTCCAGGTGGAGGTGGACCAGGAAAAGGTGGTGGAGGTGGTTATGCACCTCCTAGTAAAGGAGGCGGTGGTGGTGGGCCACCAGGAAAAGGTGGAGGTGGAGGTAGTTACACACCACCTGGAAAAGGAGGCGGCGGAGGTGGTTACACACCACCAGGGAAAGGTGGTGGAGGTGGTTATACGCCACCTGGAAGAGGAGGCGGTGGTGGTGGACCACCTGGTAGAGGCGGTGGAGGTGGTTATCCACCACCTGGAAGAGGAGGTGGTGGTGGTGGACCACCTGGTAAAGGCGGTGGAGGTGGTTATCCACCACCAGGTAGAGGTGGTGGAGGGGGTGGTGCTCCAGGTATAAGTCCAGCACCTGCCACCCAAGAAACATGTCCAATTGATGCACTGAAGTTGGGGCTTTGCTTGGACGTGCTAGGAGGTGCAGTGCATATTGGTATAGGAGACCCGGTAAAAAATGTGTGCTGTCCGGTGTTACAAGGATTGCTAGCGCTTGAGGCAGCTCTATGTCTTTGCACAGCAATAAGGATTAAGCTTCTCAACTTGCCCATATACATTCCTTTGGCTCTATCAGTCCTTGCAACCTGTGGATTGACCCCTCCACCCGGTTTTACGTGTCCTCCCGTCTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115775.p1 GENE.R_Transcript_115775~~R_Transcript_115775.p1 ORF type:complete len:390 (+),score=114.86,Hydrophob_seed|PF14547.2|3.5e-24 R_Transcript_115775:375-1544(+)
MGGSKLIAMLFIYMICMVMSLPPIYACGYCGKPHPPYGRPSPPTYRPPPHHGGGGHGGMGPPKHEGGGHGSKGPPEHGGGGHGGKHPPHHGGAPKVSPPIIMPPIIVPAPPVITPPPVIITPPSVPCPPTYGRPGPPGSSGPPGTPGTPGSPGTPGAPGTPGAPGAPGAPGAPGTPGAPGGGGPGKGGGGGYAPPSKGGGGGGPPGKGGGGGSYTPPGKGGGGGGYTPPGKGGGGGYTPPGRGGGGGGPPGRGGGGGYPPPGRGGGGGGPPGKGGGGGYPPPGRGGGGGGAPGISPAPATQETCPIDALKLGLCLDVLGGAVHIGIGDPVKNVCCPVLQGLLALEAALCLCTAIRIKLLNLPIYIPLALSVLATCGLTPPPGFTCPPVS*

Click here to download the sequence:
Link to NCBI Protein BLAST