Transcript Information: R_Transcript_115888.p1


Annotated TAIR IDAT1G51340.2
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19032021-19034681 | Forward length=515
E-Value4E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2776115734558
Replicate 20.2395015256612
Replicate 30.17419572316466
Condition 2: 8 Hour
Replicate 10.37240859235354
Replicate 20
Replicate 30.20705259262799
Condition 3: 24 Hour
Replicate 10.34916817076356
Replicate 20.083860299964172
Replicate 30.66578569389802


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115888.p1 GENE.R_Transcript_115888~~R_Transcript_115888.p1 ORF type:complete len:263 (+),score=55.60,MatE|PF01554.14|0.00021,MatE|PF01554.14|7.1e-12 R_Transcript_115888:145-933(+)
ATGAGGGGCATATATGCTTCCCTGTCTGTTTGGATGAGCAGAGGGAAGTTGCCCTTCTGGGTTTTCTTCAAGAATTCGAGGGATACTTTTAAGAAGGATGAGCTGGGTCTGGAAATAGCAGAGATTGCAGTACCAGCATCCTTGTCTTTGTTAGCAGATCCAGTTGCCTCCTTGATTGACACAGCTTATATAGGCCATATAGGTCCTGTGGAGCTTGCAGCAGTGGGGGTTGCTATCGCTGTTTTTAATCAAGTATCGAGGATCGCAATATTTCCACTTGTAAGTGTTACCACATCTTTTGTTGCCGAGGAAGATGCCTTTGGAAAAGTGAGTATCGGTACATCTGAAACTGGAAAACCAGAGAATGACTGCAGTAGTGACACTGAAATGGAAGCATTTATAATTGATGCTGAATCTGCAGCAAAGTCTTCACATGTTGGTAATAGCTGCAATGAAGTGACCAATGTAAAACAGGAGAGAAGAAACATATCATCAGCATCGTTGGCTATGTTCATTGGTGGTCTTCTTGGTCTCGTACAAGCTTTATTTCTGCTATGTTTAGCGAAGCCAATCCTAACCTATATGGGTGTTGATTCTGAATCTCCGATGCTAAAGCCAGCAAAACAGTGTTTGACATTGAGGGCACTTGGTGCTCCAGCTGTTCTTTTGTCTTTGGCAATGCAAGGGGTTTTCCGAGGTTTTAAGGATACAAAAACTCCTCTCTATGCAACTGGTAGTAGATTTTGTAGTTTTCATGACATTGCTAAGAACTTTTCACAACATATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115888.p1 GENE.R_Transcript_115888~~R_Transcript_115888.p1 ORF type:complete len:263 (+),score=55.60,MatE|PF01554.14|0.00021,MatE|PF01554.14|7.1e-12 R_Transcript_115888:145-933(+)
MRGIYASLSVWMSRGKLPFWVFFKNSRDTFKKDELGLEIAEIAVPASLSLLADPVASLIDTAYIGHIGPVELAAVGVAIAVFNQVSRIAIFPLVSVTTSFVAEEDAFGKVSIGTSETGKPENDCSSDTEMEAFIIDAESAAKSSHVGNSCNEVTNVKQERRNISSASLAMFIGGLLGLVQALFLLCLAKPILTYMGVDSESPMLKPAKQCLTLRALGAPAVLLSLAMQGVFRGFKDTKTPLYATGSRFCSFHDIAKNFSQHM*

Click here to download the sequence:
Link to NCBI Protein BLAST