Transcript Information: R_Transcript_115889.p1


Annotated TAIR IDAT1G51340.2
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19032021-19034681 | Forward length=515
E-Value4E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.177057052209
Replicate 29.7846836891486
Replicate 311.742482961911
Condition 2: 8 Hour
Replicate 15.4201720465747
Replicate 25.383979317101
Replicate 36.6614648684527
Condition 3: 24 Hour
Replicate 14.7252962449255
Replicate 27.4945054482544
Replicate 36.8850643869463


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115889.p1 GENE.R_Transcript_115889~~R_Transcript_115889.p1 ORF type:complete len:515 (+),score=85.43,MatE|PF01554.14|0.00055,MatE|PF01554.14|1.1e-13,MatE|PF01554.14|3.4e+03,MatE|PF01554.14|8.3e-15,Polysacc_synt_C|PF14667.2|2.1e+03,Polysacc_synt_C|PF14667.2|1e-07,Polysacc_synt_C|PF14667.2|1.6e+04,Polysacc_synt_C|PF14667.2|2.7e+03,Polysacc_synt_C|PF14667.2|48 R_Transcript_115889:145-1689(+)
ATGAGGGGCATATATGCTTCCCTGTCTGTTTGGATGAGCAGAGGGAAGTTGCCCTTCTGGGTTTTCTTCAAGAATTCGAGGGATACTTTTAAGAAGGATGAGCTGGGTCTGGAAATAGCAGAGATTGCAGTACCAGCATCCTTGTCTTTGTTAGCAGATCCAGTTGCCTCCTTGATTGACACAGCTTATATAGGCCATATAGGTCCTGTGGAGCTTGCAGCAGTGGGGGTTGCTATCGCTGTTTTTAATCAAGTATCGAGGATCGCAATATTTCCACTTGTAAGTGTTACCACATCTTTTGTTGCCGAGGAAGATGCCTTTGGAAAAGTGAGTATCGGTACATCTGAAACTGGAAAACCAGAGAATGACTGCAGTAGTGACACTGAAATGGAAGCATTTATAATTGATGCTGAATCTGCAGCAAAGTCTTCACATGTTGGTAATAGCTGCAATGAAGTGACCAATGTAAAACAGGAGAGAAGAAACATATCATCAGCATCGTTGGCTATGTTCATTGGTGGTCTTCTTGGTCTCGTACAAGCTTTATTTCTGCTATGTTTAGCGAAGCCAATCCTAACCTATATGGGTGTTGATTCTGAATCTCCGATGCTAAAGCCAGCAAAACAGTGTTTGACATTGAGGGCACTTGGTGCTCCAGCTGTTCTTTTGTCTTTGGCAATGCAAGGGGTTTTCCGAGGTTTTAAGGATACAAAAACTCCTCTCTATGCAACTGTTGTGGGAGACGTAACAAACATAATTCTCGATCCAATACTTATATTCATATTTCGTATGGGTGTAAGTGGTGCTGCCATTTCCCATGTTATTTCTCAGTATATAATTTCAATGATCCTCATGTGGAAATTACTTCAACAAGTTAATCTTTTGACCCCGCGTTTACAAGATCTGCAATTTGTAAGATTTCTCAAAAATGGATTCTGGTTACTGTTGAGAGTAATAGCTGTCACCTTTTGTGTAACTGTGGGAGCTTCATTAGCTACAAGGCTGGGCTCAATACCAATGGCAGCTTTCCAGATTTGCTTGCAGATCTGGTTAGCAGCTTCATTGCTTGTTGATGGATTAGCTGTTGCTGGACAAGCTATCCTTGCCAGTGCATTTGCGAAGAAGGATTTTGAGAAAGCCACAACCACCACATGTCGAGTACTGCAGTTGGGTCTGATTTTTGGAATATTCCTTTCACTAGTCCTTGTAGTTGTTTTGCGATTTGCATCAAGGTTATTCACTGACGATATCAGTGTCCAGCAGCTGATAAATCTAGGCGCTCCGTTTGTTGCAGCAACTCAGCCGATTAATGCATTAGCATTTGTTTTTGATGGCATCAACTATGGAGCCTCAGATTTTGCATATGCTGCGTACTCCATGGTGTTTGTGTCTGTTCTGAGTATCTTGTGTTTATTGCTGCTGTCTTCATCACACGGTTTTGTGGGCATATGGCTTGCCTTGTCCATATTCATGTCTTTGCGCGCATTAGCTGGCTTTTGGAGGATAGGGACTGGAACTGGACCTTGGAGCTTCTTCAGAGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115889.p1 GENE.R_Transcript_115889~~R_Transcript_115889.p1 ORF type:complete len:515 (+),score=85.43,MatE|PF01554.14|0.00055,MatE|PF01554.14|1.1e-13,MatE|PF01554.14|3.4e+03,MatE|PF01554.14|8.3e-15,Polysacc_synt_C|PF14667.2|2.1e+03,Polysacc_synt_C|PF14667.2|1e-07,Polysacc_synt_C|PF14667.2|1.6e+04,Polysacc_synt_C|PF14667.2|2.7e+03,Polysacc_synt_C|PF14667.2|48 R_Transcript_115889:145-1689(+)
MRGIYASLSVWMSRGKLPFWVFFKNSRDTFKKDELGLEIAEIAVPASLSLLADPVASLIDTAYIGHIGPVELAAVGVAIAVFNQVSRIAIFPLVSVTTSFVAEEDAFGKVSIGTSETGKPENDCSSDTEMEAFIIDAESAAKSSHVGNSCNEVTNVKQERRNISSASLAMFIGGLLGLVQALFLLCLAKPILTYMGVDSESPMLKPAKQCLTLRALGAPAVLLSLAMQGVFRGFKDTKTPLYATVVGDVTNIILDPILIFIFRMGVSGAAISHVISQYIISMILMWKLLQQVNLLTPRLQDLQFVRFLKNGFWLLLRVIAVTFCVTVGASLATRLGSIPMAAFQICLQIWLAASLLVDGLAVAGQAILASAFAKKDFEKATTTTCRVLQLGLIFGIFLSLVLVVVLRFASRLFTDDISVQQLINLGAPFVAATQPINALAFVFDGINYGASDFAYAAYSMVFVSVLSILCLLLLSSSHGFVGIWLALSIFMSLRALAGFWRIGTGTGPWSFFRG*

Click here to download the sequence:
Link to NCBI Protein BLAST