Transcript Information: R_Transcript_115895.p1


Annotated TAIR IDAT5G27290.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9618590-9620473 | Reverse length=341
E-Value1.5E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.67188813330253
Replicate 20.51524663598277
Replicate 31.2647891924256
Condition 2: 8 Hour
Replicate 10.30044006070239
Replicate 20.68591662089526
Replicate 30
Condition 3: 24 Hour
Replicate 10.8450726586885
Replicate 20.27061667350402
Replicate 30.67140198426065


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115895.p1 GENE.R_Transcript_115895~~R_Transcript_115895.p1 ORF type:complete len:163 (+),score=40.35 R_Transcript_115895:163-651(+)
ATGGCATTGGGCACCCTCACTTCACTTGGTACCTTTGCATTTACAATATCATGTGGGCCCACCTCCGAAGCTAGAGGAGGAGTTGACAGAAGAAAGCTTTTGGACAAGCTAGACAAGGAGCTCTCCAATGGCGATGAAAGGGCTGCTCTTTCTCTTGTCAAACATTCTCAGGGCCAGCCTGGTGGTCTCCGTTGCTTTGGGACAGCTCGACAGGTGCCTCAAAGGCTATATACTTTGGATGAACTGAAGTTGAATGGAATTGAAGCTGCATCTCTCTTATCACCTGTTGATACCACTCTTGGTTCGATTGAGAGGAACCTGCAGATTGCTGCTGTGTTAGGTGGCGTTGCTGCTTGGAATGCCCTTGGACTTAGCCCCCAACAAGTCCTTTATTCCTCTTTGGGATTGTTGTTTTTTTGGACATTGGACTTGGTAACTTTTGCTTTTTTGTCGAACTTGAGATACTATGTTCAGCATCTAAACCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115895.p1 GENE.R_Transcript_115895~~R_Transcript_115895.p1 ORF type:complete len:163 (+),score=40.35 R_Transcript_115895:163-651(+)
MALGTLTSLGTFAFTISCGPTSEARGGVDRRKLLDKLDKELSNGDERAALSLVKHSQGQPGGLRCFGTARQVPQRLYTLDELKLNGIEAASLLSPVDTTLGSIERNLQIAAVLGGVAAWNALGLSPQQVLYSSLGLLFFWTLDLVTFAFLSNLRYYVQHLNL*

Click here to download the sequence:
Link to NCBI Protein BLAST