Transcript Information: R_Transcript_115901.p1


Annotated TAIR IDAT5G27290.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9618590-9620473 | Reverse length=341
E-Value7.7E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.96068215551151
Replicate 20.15786692042329
Replicate 30.68892443898203
Condition 2: 8 Hour
Replicate 10.73641699089459
Replicate 20.92469812125203
Replicate 30.61415223903565
Condition 3: 24 Hour
Replicate 10.6904603677505
Replicate 20.4974870426446
Replicate 31.069699853119


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115901.p1 GENE.R_Transcript_115901~~R_Transcript_115901.p1 ORF type:complete len:266 (+),score=56.47 R_Transcript_115901:163-960(+)
ATGGCATTGGGCACCCTCACTTCACTTGGTACCTTTGCATTTACAATATCATGTGGGCCCACCTCCGAAGCTAGAGGAGGAGTTGACAGAAGAAAGCTTTTGGACAAGCTAGACAAGGAGCTCTCCAATGGCGATGAAAGGGCTGCTCTTTCTCTTGTCAAACATTCTCAGGGCCAGCCTGGTGGTCTCCGTTGCTTTGGGACAGCTCGACAGGTGCCTCAAAGGCTATATACTTTGGATGAACTGAAGTTGAATGGAATTGAAGCTGCATCTCTCTTATCACCTGTTGATACCACTCTTGGTTCGATTGAGAGGAACCTGCAGATTGCTGCTGTGTTAGGTGGCGTTGCTGCATGGAATGCCCTTGGACTTGGCCCCCAACAAGTCCTTTATACCTCTTTGGGATTGTTGTTTTTGTGGACATTGGACTTGGTTTCTTTTAATGGGGGAATCGGAAGCTTGGTTCTTGATACAATTGGCCATACTGTTAGTAAAAAGTATCACAACCGTGTTATTCAACATGAGGCTGGCCACTTCTTGATCGCCTACTTGGTTGGTATCCTCCCAAGGGCATACACACTTTCAAGCTTAGAAGCATTGAGTAAAGAAGGCTCCCTTAATGTTCAAGCCGGGTCAACTTTTGTGGACTTTGAATTCCTTGATGAAGTAGGCTTGTTTATGCTCTGCTCTGCTGATTTTTTTTTTGTTCGTCTCTCCTTTGCATTCTTTGTATTTGTGCAAGTCCTACTTGCACATTTATTGCCCTGGCCTACATTATTCCTTGGACATATGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115901.p1 GENE.R_Transcript_115901~~R_Transcript_115901.p1 ORF type:complete len:266 (+),score=56.47 R_Transcript_115901:163-960(+)
MALGTLTSLGTFAFTISCGPTSEARGGVDRRKLLDKLDKELSNGDERAALSLVKHSQGQPGGLRCFGTARQVPQRLYTLDELKLNGIEAASLLSPVDTTLGSIERNLQIAAVLGGVAAWNALGLGPQQVLYTSLGLLFLWTLDLVSFNGGIGSLVLDTIGHTVSKKYHNRVIQHEAGHFLIAYLVGILPRAYTLSSLEALSKEGSLNVQAGSTFVDFEFLDEVGLFMLCSADFFFVRLSFAFFVFVQVLLAHLLPWPTLFLGHME*

Click here to download the sequence:
Link to NCBI Protein BLAST