Transcript Information: R_Transcript_115902.p1


Annotated TAIR IDAT5G27290.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9618590-9620473 | Reverse length=341
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7383772337827
Replicate 20.24995595733688
Replicate 31.0907970283882
Condition 2: 8 Hour
Replicate 12.3319871378329
Replicate 20.53240194859966
Replicate 30.86436241049462
Condition 3: 24 Hour
Replicate 11.3665361445062
Replicate 21.8379382408814
Replicate 33.126814955271


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_115902.p1 GENE.R_Transcript_115902~~R_Transcript_115902.p1 ORF type:complete len:84 (+),score=18.92 R_Transcript_115902:163-414(+)
ATGGCATTGGGCACCCTCACTTCACTTGGTACCTTTGCATTTACAATATCATGTGGGCCCACCTCCGAAGCTAGAGGAGGAGTTGACAGAAGAAAGCTTTTGGACAAGCTAGACAAGGAGCTCTCCAATGGCGATGAAAGGGCTGCTCTTTCTCTTGTCAAACATTCTCAGGGCCAGCCTGGTGGTCTCCGTTGCTTTGGGACAGCTCGACAGTGCAGGTGCCTCAAAGGCTATATACTTTGGATGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_115902.p1 GENE.R_Transcript_115902~~R_Transcript_115902.p1 ORF type:complete len:84 (+),score=18.92 R_Transcript_115902:163-414(+)
MALGTLTSLGTFAFTISCGPTSEARGGVDRRKLLDKLDKELSNGDERAALSLVKHSQGQPGGLRCFGTARQCRCLKGYILWMN*

Click here to download the sequence:
Link to NCBI Protein BLAST