Transcript Information: R_Transcript_116054.p1


Annotated TAIR IDAT3G14040.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4648607-4650226 | Reverse length=445
E-Value3E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7478800171234
Replicate 23.2768792557228
Replicate 33.7074488594929
Condition 2: 8 Hour
Replicate 15.5199348725004
Replicate 28.0137264401937
Replicate 36.2953562845273
Condition 3: 24 Hour
Replicate 14.3792349047066
Replicate 23.5696372770876
Replicate 32.7834075324378


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116054.p1 GENE.R_Transcript_116054~~R_Transcript_116054.p1 ORF type:complete len:173 (+),score=28.01,Glyco_hydro_28|PF00295.13|1.2e-34 R_Transcript_116054:377-895(+)
ATGACTGTGTTTCGATGGGAGATGGAGCCAAGCAGATCCATGTTGAGGGAGTCACCTGTGGGCCTTGGCAGGTACCCGAATGAGTCCCCCGTCGAAGGAGTTACTATCAAGGGCTGCAACATAAGCAACACAGAAAATGGTGTCAAGATCAAGTCATGGCTAAACTCTTATGAAACTACTGCTGCAGACTTGCACTTTGAGGACATTTCAGTCAACAATGTTCTCACCCCTATAGTTGTCGATCAAGAGTATTGTCCATACAACCATTGCAAAGCTAAGACTCCATCCAAGGTGAAGCTGAGCGATGTTAGCTTCAAGAACGTGAGAGGAACAGCAGGAAGCCGAGAGGCGGTGAAGCTAATATGCAGTGAAGGAGCACCCTGTGAGAAGGTGGAACTCACAGACATTGACTTGACATTCAACGGTGGGGAAGCCGTCTCGCTATGTAAAAACGTTAAGCCAGTCACATCAGGCAAGCAGAACCCTCCAGCTTGTGGTGCTCAACCTCTTTCAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116054.p1 GENE.R_Transcript_116054~~R_Transcript_116054.p1 ORF type:complete len:173 (+),score=28.01,Glyco_hydro_28|PF00295.13|1.2e-34 R_Transcript_116054:377-895(+)
MTVFRWEMEPSRSMLRESPVGLGRYPNESPVEGVTIKGCNISNTENGVKIKSWLNSYETTAADLHFEDISVNNVLTPIVVDQEYCPYNHCKAKTPSKVKLSDVSFKNVRGTAGSREAVKLICSEGAPCEKVELTDIDLTFNGGEAVSLCKNVKPVTSGKQNPPACGAQPLSA*

Click here to download the sequence:
Link to NCBI Protein BLAST