Transcript Information: R_Transcript_116057.p1


Annotated TAIR IDAT3G07850.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2505813-2507438 | Reverse length=444
E-Value2E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.5616295678375
Replicate 20.64604001280917
Replicate 30.88102836908279
Condition 2: 8 Hour
Replicate 12.0718808801515
Replicate 21.5480610505436
Replicate 31.2566499660268
Condition 3: 24 Hour
Replicate 10.88299258568093
Replicate 20.33931167523965
Replicate 31.1785687139099


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116057.p1 GENE.R_Transcript_116057~~R_Transcript_116057.p1 ORF type:complete len:130 (+),score=17.52,Glyco_hydro_28|PF00295.13|5.4e-17 R_Transcript_116057:377-766(+)
ATGACTGTGTTTCGATGGGAGATGGAGCCAAGCAGATCCATGTTGAGGGAGTCACCTGTGGGCCTTGGCAGGTACCCGAATGAGTCCCCCGTCGAAGGAGTTACTATCAAGGGCTGCAACATAAGCAACACAGAAAATGGTGTCAAGATCAAGTCATGGCTAAACTCTTATGAAACTACTGCTGCAGACTTGCACTTTGAGGACATTTCAGTCAACAATGTTCTCACCCCTATAGTTGTCGATCAAGAGTATTGTCCATACAACCATTGCAAAGCTAAGGTGGCATCTCAACTCTCTCATTGGACTAAAGTCATAGCCCTGTTTGATAGTACAAAAGACTTCAACTTTAAGTTCACTTTAGATTTAGTTGATCACTTGGATTCAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116057.p1 GENE.R_Transcript_116057~~R_Transcript_116057.p1 ORF type:complete len:130 (+),score=17.52,Glyco_hydro_28|PF00295.13|5.4e-17 R_Transcript_116057:377-766(+)
MTVFRWEMEPSRSMLRESPVGLGRYPNESPVEGVTIKGCNISNTENGVKIKSWLNSYETTAADLHFEDISVNNVLTPIVVDQEYCPYNHCKAKVASQLSHWTKVIALFDSTKDFNFKFTLDLVDHLDSI*

Click here to download the sequence:
Link to NCBI Protein BLAST