Transcript Information: R_Transcript_116080.p1


Annotated TAIR IDAT3G48900.2
Annotated Gene Namesingle-stranded DNA endonuclease family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18131854-18136239 | Forward length=600
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7784936314854
Replicate 20
Replicate 32.2319385350097
Condition 2: 8 Hour
Replicate 11.381253920101
Replicate 21.3760542671499
Replicate 31.6755332880357
Condition 3: 24 Hour
Replicate 13.4142379979663
Replicate 21.1310389174655
Replicate 31.2346910336198


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116080.p1 GENE.R_Transcript_116080~~R_Transcript_116080.p1 ORF type:3prime_partial len:195 (+),score=25.52 R_Transcript_116080:330-911(+)
ATGGCTTACAAATTGACTTGGCCATATAAAAGCCCATGGGCAGGGTCATGGCTCTATATTTTAACCATTGACGTGGTTGGATTAACTATTCTATGTCATTGTTTCCTTGTGCAGATGCCAATTAAGTGTTCTGTAGCAGAAGTTCTTAACCACAGAAGAGTTGTAGGTAAAGAATGCTTCGAAGTGTCATGGGAAAATTTTGACGGCCTTAAAACTTCCATAGTACCAGCTGATCTTGTAGAGAGTGCTTGTCCCGAGAAAATTGAAGAATTTGAGGAAAGGAGAGCTCAGAAGAAGCAGAAAAACAAACCAAGACCTAGCAAAAAATCAGAAGACAAAGCTTCTGTGGCCAACGTTGATCAGAAACTCCAACAATTGTTACTCGATATCGAGGCTGAGGACAATGTGAGAAGCAGAAACCCGTTGTGCTCTAGTACATCTGTGTCAGGAAGCAGCATAGTCGGTTCTTTGTTCTCCAGTACATCTATGTCAGGAAGCAGCAGCATAGTCATTTCTTCATGTCGTAGTACATTTATGTCAGAAAGCAGTAGTGTGGTCGATTTGACAATTTCTGACCCTTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116080.p1 GENE.R_Transcript_116080~~R_Transcript_116080.p1 ORF type:3prime_partial len:195 (+),score=25.52 R_Transcript_116080:330-911(+)
MAYKLTWPYKSPWAGSWLYILTIDVVGLTILCHCFLVQMPIKCSVAEVLNHRRVVGKECFEVSWENFDGLKTSIVPADLVESACPEKIEEFEERRAQKKQKNKPRPSKKSEDKASVANVDQKLQQLLLDIEAEDNVRSRNPLCSSTSVSGSSIVGSLFSSTSMSGSSSIVISSCRSTFMSESSSVVDLTISDPF

Click here to download the sequence:
Link to NCBI Protein BLAST