Transcript Information: R_Transcript_116082.p1


Annotated TAIR IDAT3G48900.2
Annotated Gene Namesingle-stranded DNA endonuclease family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18131854-18136239 | Forward length=600
E-Value9.2E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0590455161441
Replicate 20.7165972838327
Replicate 30.62543993436594
Condition 2: 8 Hour
Replicate 10.50141702963642
Replicate 20.3815850143547
Replicate 30.55755800540438
Condition 3: 24 Hour
Replicate 10.94025149055444
Replicate 20.52691744789775
Replicate 30.82172270155587


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116082.p1 GENE.R_Transcript_116082~~R_Transcript_116082.p1 ORF type:complete len:293 (+),score=63.15,XPG_N|PF00752.13|9.8e-14 R_Transcript_116082:172-1050(+)
ATGGGGGTGAAAAATTTATGGGATATTTTGGAGTCTTGCAAGAAAACCTTGCCACTTCATCACCTCCAGAATAAGAGGGTGTGCATAGACCTGTCATGTTGGATGGTTCAGCTCCAAAAAGTGAATAAATCTTACTGTGCTGCCAAAGAGAAGGTTTACCTTAGGGGTCTCTTTCACCGTCTCCGGGCTCTTATTGCTCTCAATTGTAGTCTTATCTTTGTAACTGATGGAGCAATTCCTGCTGTCAAAATTTCTACATACAGAAAGCGGTTAAATGCTGCCCATGAGGATGCAGAAGATGATGCAGAGAGAGACAAGATTTCTTCCCTTCGAAGAAATAAGGGCTCTGAGTTCTCTTGTATGATCAAAGAGGCAAAAACCTTAGGCAGGGCACTTGGCATTCCTTGCTTAGATGGGATTGAGGAAGCTGAAGCACAATGTGCGCTATTGAACTCAGAATCAATATGTATTGCCCTAGCCCTTCTTCTGGGAAGTGATTATTCTCATGGAGTCTATGGATTTGGACCTGAGTCAGCATGCCAAGTCATTAGATCAGTCGGCGAAGATGCCATTCTTCAACGCATTGCATCAGATGGTATATCTTTCTTAAAGTCGCTGAAAACCTCGAAGAAACATGGACAGTTCCCTGTGAACAACGGGAAAGAGAATAACCTAGCTCCTACTGGAAAGGCTACTGGGAATGAATTGTTACGGGTTGTGGATGCATATATGAAGCCTAAGTGTCATTCTGCAGACTCGGATCCTGTATATAGGGCTCTTGCTGTGCATCCTTTTCAGCGTACTGAGCTTCAGCAAATATGTGCTCAGTTCTTTGAGTGGCCGCCTGAGAAAACAGGTTCCTGTTATGCCAGCCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116082.p1 GENE.R_Transcript_116082~~R_Transcript_116082.p1 ORF type:complete len:293 (+),score=63.15,XPG_N|PF00752.13|9.8e-14 R_Transcript_116082:172-1050(+)
MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWMVQLQKVNKSYCAAKEKVYLRGLFHRLRALIALNCSLIFVTDGAIPAVKISTYRKRLNAAHEDAEDDAERDKISSLRRNKGSEFSCMIKEAKTLGRALGIPCLDGIEEAEAQCALLNSESICIALALLLGSDYSHGVYGFGPESACQVIRSVGEDAILQRIASDGISFLKSLKTSKKHGQFPVNNGKENNLAPTGKATGNELLRVVDAYMKPKCHSADSDPVYRALAVHPFQRTELQQICAQFFEWPPEKTGSCYASR*

Click here to download the sequence:
Link to NCBI Protein BLAST