Transcript Information: R_Transcript_116084.p2


Annotated TAIR IDAT3G48900.2
Annotated Gene Namesingle-stranded DNA endonuclease family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18131854-18136239 | Forward length=600
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.638086239526
Replicate 22.9610167253754
Replicate 32.1536249022024
Condition 2: 8 Hour
Replicate 10.73248313944751
Replicate 21.5289491857221
Replicate 31.861703653373
Condition 3: 24 Hour
Replicate 12.3546468951491
Replicate 21.3195454037098
Replicate 32.1513555888831


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116084.p2 GENE.R_Transcript_116084~~R_Transcript_116084.p2 ORF type:complete len:234 (+),score=47.68 R_Transcript_116084:2627-3328(+)
ATGTCAGGAAGCAGCAGCATAGTCATTTCTTCATGTCGTAGTACATTTATGTCAGAAAGCAGTAGTGTGGTCGATTTGACAATTTCTGACCCTTTCTTTAATGGACAGCATGAATGTAACATGACTGGCATGTCCAGTAAGGAAAGCCACTCAGGCCCTCCTTCAGCTACAACATCTTTGTCAAGAAGCAGCGACAGAGATGATTCACCGTGCTCTAGTACATCTATGTCAGGAAGCAGCAGCATAGTCGATTTGACGATGCCTGACACTTTTGGTAGTGAAGACTGTGAATACAATATAGCTGGCATGCCCACAAAGGATAGCCACTCGGACCCCTCTCCAACTACTATGGAAATGGATGTCATTGACCTTTTGAGCCCACCCCCAGCACCTAGCACACGTTTTCTTTCAAAATGTAAAGGCGACACAGAACCAGATTATCTACCGAACATGGATGGCATGCCAACCAAGGATGGCGGCTCAGAGGCTCGTCAAACTAGTACAATGGAAATGGATGTTATTGACCTCTTGAGTCCTCCTCAGGCACCTAGCACAGGTTTCCTTTCAAAATGTAAGGGCGACGCAGAACCAACAAGTGTTATTGATCTGAGTGGTTCAGATGTTGAAATGTCACCTGAACATGCTCAGAAGTCAAAAGAACTCAGATTGTTCCTGGCTAGCATTAGGGCAGAAATATCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116084.p2 GENE.R_Transcript_116084~~R_Transcript_116084.p2 ORF type:complete len:234 (+),score=47.68 R_Transcript_116084:2627-3328(+)
MSGSSSIVISSCRSTFMSESSSVVDLTISDPFFNGQHECNMTGMSSKESHSGPPSATTSLSRSSDRDDSPCSSTSMSGSSSIVDLTMPDTFGSEDCEYNIAGMPTKDSHSDPSPTTMEMDVIDLLSPPPAPSTRFLSKCKGDTEPDYLPNMDGMPTKDGGSEARQTSTMEMDVIDLLSPPQAPSTGFLSKCKGDAEPTSVIDLSGSDVEMSPEHAQKSKELRLFLASIRAEIS*

Click here to download the sequence:
Link to NCBI Protein BLAST