Transcript Information: R_Transcript_116089.p1


Annotated TAIR IDAT1G53210.1
Annotated Gene Namesodium/calcium exchanger family protein / calcium-binding EF hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19844790-19847533 | Forward length=585
E-Value2E-217
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 189.646501018845
Replicate 281.820634611966
Replicate 387.517906733341
Condition 2: 8 Hour
Replicate 197.489082913671
Replicate 2111.25115027377
Replicate 3127.95949837341
Condition 3: 24 Hour
Replicate 1106.26861283752
Replicate 2103.81887844781
Replicate 394.545858389794


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116089.p1 GENE.R_Transcript_116089~~R_Transcript_116089.p1 ORF type:5prime_partial len:485 (+),score=113.29,Na_Ca_ex|PF01699.20|8.1e-07,Na_Ca_ex|PF01699.20|9.7e-15,EF-hand_7|PF13499.2|2e-07,EF-hand_1|PF00036.28|0.14,EF-hand_1|PF00036.28|0.0083 R_Transcript_116089:3-1457(+)
TATGCTGCTACTCTGTTGTCTGATGGGAGTGAGCTTTTGTTGGAGATTTTGGGTCCTGGTGTTATTGGTGGCCTCTTTCTTCCTGTGCTTGGTGCTTTGCCTGATGCCATGCTCATCCTTGTATCTGGTCTTTCTGGAAGTGTTGCAACTGCTCAAGACCAAGTTTCAGTTGGGATGGGATTGCTTGCTGGGTCTACTGTGATGCTTCTTACAGTAATATGGGGGACTTGCATTATTGTTGGAAAGTGTGATCTGGAGGACTCACTTGCAGTTGATGAGAAAGATACTAAAGGGTTTAATTTGATTGGTTCTGGTGTGACTACTGATATATGGACTAGTTATGCTGCGAGGATCATGGCTATTTCTGTATTTCCCTTCCTTGTGGTGCAGTTACTACAATTGCTTAAGTCAAATTCTGGAAGACGCTTGGCAGTATTGATTGCCCTCATAATCTCTGTGGTCATGCTGATTAGTTACTGTCTTTATCAGATTCTCCAACCAAAAATCCAAGAGAGGCGCATTGATTATGTGAGAAGTAAGCGTATTTTGACAGGATTTCTTAGACATTTGAAAAAGCATGCTCTTGGAAGACTCTGCCATTCAGATGGCACTCCTAACTATGATGTCATTAAAAAGCTGTTTGTAGCGATTGATCAGGATAATAGCAAAAGTCTCTCAAAAGGGGAACTTAGAGCATTTGTTGTTGGAATGGAACTTGAAGGGATGACTGTGGGTGAGGAGGATATTGCTGACAAAATAATGAGAACATTTGATACTGACAATCCTGATGGTAAAATTGACTACCAGGAGTTTGAAAAAGGAATTGTAAAGCTGCTTGACCGTGTAAGAGGCAACAATGTTCATGTGGACACTAGTAAACATATAGAGTCATATGATGAGGAAGCGAAAGTAGAGCATCTTCTACTTGGTGATTCAAGTGATGAGAGTGGTGGTGAGGAAGTTGAAAATACCAAGAAAATGACCATCAAGGCAATATTGTACTTGGTGCTTGGGACTCTTATAGCTGCTGTTTTTGCAGATCCACTAGTAGATGCTGTTGATAATTTCTCTGATGCAACCAGTATCCCTTCGTTCTTTATCTCATTCATTGCCCTACCATTAGCAACCAACTCCAGTGAAGCAGTATCCGCTATAATTTTTGCCAGCAGAAAGAAGAAGAAATCTGCTTCCTTGACGTTTTCTGAGATATACGGAGCGGTAACGATGAACAATGTGCTATGTCTTTCGGTGTTTTTGGCCCTGGTTTATGTAAGAGGATTGACCTGGGACTTCTCCTCTGAAGTGCTCGTCATCTTCCTTGTATGCATCATAATGGGTGCTCTCGGCAGCTTCAGAACTACATTCTCCCTCTGGACAGCTGCAGTGGCTTTCCTTCTGTACCCATTGTCACTCGTGCTTGTGTATGTGCTTGACTATATTTTTGGATGGTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116089.p1 GENE.R_Transcript_116089~~R_Transcript_116089.p1 ORF type:5prime_partial len:485 (+),score=113.29,Na_Ca_ex|PF01699.20|8.1e-07,Na_Ca_ex|PF01699.20|9.7e-15,EF-hand_7|PF13499.2|2e-07,EF-hand_1|PF00036.28|0.14,EF-hand_1|PF00036.28|0.0083 R_Transcript_116089:3-1457(+)
YAATLLSDGSELLLEILGPGVIGGLFLPVLGALPDAMLILVSGLSGSVATAQDQVSVGMGLLAGSTVMLLTVIWGTCIIVGKCDLEDSLAVDEKDTKGFNLIGSGVTTDIWTSYAARIMAISVFPFLVVQLLQLLKSNSGRRLAVLIALIISVVMLISYCLYQILQPKIQERRIDYVRSKRILTGFLRHLKKHALGRLCHSDGTPNYDVIKKLFVAIDQDNSKSLSKGELRAFVVGMELEGMTVGEEDIADKIMRTFDTDNPDGKIDYQEFEKGIVKLLDRVRGNNVHVDTSKHIESYDEEAKVEHLLLGDSSDESGGEEVENTKKMTIKAILYLVLGTLIAAVFADPLVDAVDNFSDATSIPSFFISFIALPLATNSSEAVSAIIFASRKKKKSASLTFSEIYGAVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVIFLVCIIMGALGSFRTTFSLWTAAVAFLLYPLSLVLVYVLDYIFGWS*

Click here to download the sequence:
Link to NCBI Protein BLAST