Transcript Information: R_Transcript_116143.p1


Annotated TAIR IDAT5G53920.1
Annotated Gene Nameribosomal protein L11 methyltransferase-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21892124-21894087 | Forward length=371
E-Value1.6E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0772134742658
Replicate 20.55922349777065
Replicate 31.9412489488265
Condition 2: 8 Hour
Replicate 10.53359027730074
Replicate 21.8408474154971
Replicate 32.7688897556522
Condition 3: 24 Hour
Replicate 12.6682197262223
Replicate 22.883738450584
Replicate 31.8018933640545


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116143.p1 GENE.R_Transcript_116143~~R_Transcript_116143.p1 ORF type:complete len:413 (+),score=80.48,PrmA|PF06325.9|1.2e-75,Methyltransf_18|PF12847.3|2.8e-08,MTS|PF05175.10|2.2e-06,Methyltransf_31|PF13847.2|1.1e-05,Methyltransf_26|PF13659.2|1.8e-05 R_Transcript_116143:75-1241(+)
ATGTCAGGAGTTCCATTGAGTAATTTCTTCAAACACCTTACGTGCACTCTCACTACCCAACTTCCTAAGCGTTCACACCGCCTACTTCATCGTTTCCCTCCTTCTTTATCTTCCCCTAACTCTTTTCCTCACCTCACACCTCCCTTCAGCAAGTTCAAGCATCATCAATGGCGACCCTCCTCAGTATCTGCTTCTCTTTCATCAACCCCAGCACCTTCCAATGCTCCTGGTGTGCCCCCTTATTTTTCTGTCCTCATTCACTGCCGCAAGGATGAAGCTGATGTTCTCTCAGAAGCTCTTTTAAGTTTTGGTGCAAGTTCTGTCAGCATGGATGATCATGATGATTATGAGAACTCCGATAAGGTCAGCATTTGTTCAATATTCACTGGATGTGAGGATGTAAATTCATGCATATCACGTGCTGCAGACTCTATTGGCATGGGAATGCCAACTTTTGAACTCTTAGAGTATAATCCCTATGACTGGATAAAAAGAACTCAGGAATCATTTGATCCAGTGGAAGTAACCAAAGGCTTCTGGATTGTGCCTGAGTGGAAAGCTCCTCCTGATCCAAAGGCAACAAATATAATTCTAAATCCTGGTTTGGCTTTTGGAACGGGAGAGCATGCTACAACCAAGTTGTGTCTGTTGTTGCTACATCAAACCATTAAAGGGGGTGAATTATTTCTGGACTTTGGAACAGGATCAGGAATTCTCTCAGTTGCAGCACTGAAGTTGGGTGCTGCTATGTCAGTTGGAGTTGATATTGATCCTCAAGCAATAAGAGCTGCACGTCAGAACGCTGATCTAAATAATATAGAACCTGGTAAATTAATATTAGAACTAGTTCACATGGAGGGTGGTGCTTTTTCTGTAGAAGAAGAGGCACATGAAGAACTGCATACTGAGAAGTCGGCTGGAGATAAAGTTTTCACAGACAGAGATCAATACGACATCATCATTGCAAATATCCTCTTAAATCCACTGCTGGATTTGGCAGATAAGATTGTTTCACATGCCAAAGCTGGAGCTACCGTTGGTCTCTCTGGAATATTGCACGAGCAGGTTCCATCTGTTATAGAACGGTATTCACAGTTCTTGGATGACATTTCAGTCTCAAAGATGGAGGATTGGGCTTGCATTAAGGGCAGAAAGAAGACAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116143.p1 GENE.R_Transcript_116143~~R_Transcript_116143.p1 ORF type:complete len:413 (+),score=80.48,PrmA|PF06325.9|1.2e-75,Methyltransf_18|PF12847.3|2.8e-08,MTS|PF05175.10|2.2e-06,Methyltransf_31|PF13847.2|1.1e-05,Methyltransf_26|PF13659.2|1.8e-05 R_Transcript_116143:75-1241(+)
MSGVPLSNFFKHLTCTLTTQLPKRSHRLLHRFPPSLSSPNSFPHLTPPFSKFKHHQWRPSSVSASLSSTPAPSNAPGVPPYFSVLIHCRKDEADVLSEALLSFGASSVSMDDHDDYENSDKVSICSIFTGCEDVNSCISRAADSIGMGMPTFELLEYNPYDWIKRTQESFDPVEVTKGFWIVPEWKAPPDPKATNIILNPGLAFGTGEHATTKLCLLLLHQTIKGGELFLDFGTGSGILSVAALKLGAAMSVGVDIDPQAIRAARQNADLNNIEPGKLILELVHMEGGAFSVEEEAHEELHTEKSAGDKVFTDRDQYDIIIANILLNPLLDLADKIVSHAKAGATVGLSGILHEQVPSVIERYSQFLDDISVSKMEDWACIKGRKKTS*

Click here to download the sequence:
Link to NCBI Protein BLAST