Transcript Information: R_Transcript_116229.p1


Annotated TAIR IDAT1G73030.1
Annotated Gene NameSNF7 family protein
Annotated Gene Symbol(s)VPS46.2, CHMP1A
Annotation TypeOrtholog
Chromosome Positionchr1:27473938-27474848 | Forward length=203
E-Value2.9E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1138.54442558801
Replicate 2127.82138009532
Replicate 3145.59745896481
Condition 2: 8 Hour
Replicate 1120.5182328379
Replicate 2147.90905256901
Replicate 3148.31194043487
Condition 3: 24 Hour
Replicate 1130.35554933194
Replicate 2121.68047709875
Replicate 3118.62068247387


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116229.p1 GENE.R_Transcript_116229~~R_Transcript_116229.p1 ORF type:complete len:205 (+),score=37.46,Snf7|PF03357.17|1.8e-13,Snf7|PF03357.17|1.3e+02 R_Transcript_116229:262-876(+)
ATGGGGAACACCGAGAAGCTGATGAACCAAATCATGGAGCTAAAATTCACCTCGAAATCGCTCCAACGCCAATCACGAAAGTGCGAGAAAGAAGAAAAGGCCGAGAAACTCAAGGTCAAGAAAGCAATCGAGAAAGGCAACATGGATGGAGCTCGGATCTACGCCGAAAACGCAATCCGTAAGCGTACGGAACAGATGAACTACCTCCGCCTTGCATCTCGCCTTGATGCGGTCGTCGCACGTCTCGACACTCAAGCCAAGATGCAAACTATCGGAAAGTCCATGTCATCGATCGTGAAATCGCTAGAATCCTCATTGAACACCGGAAACCTCCAGAAGATGTCGGAGACAATGGACCAGTTCGAGAAGCAGTTTGTTAACATGGAGGTCCAGGCTGAGTTTATGGAGAGCTCAATGGCTGGAAGCACCTCCCTTTCGACTCCTGAAACCGAGGTTAATAGCTTGATGCAGCAAGTGGCTGATGATTATGGCCTTGAGGTGTCGGTGGGCTTGCCTCAGGCTGCTGGACATGCCATTGCGGCTCCTACGGCGTCAGAGAAGGTTGATGAGGATGACCTGTCCAGGAGGCTTGCTGAGCTTAAGGCTCGAGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116229.p1 GENE.R_Transcript_116229~~R_Transcript_116229.p1 ORF type:complete len:205 (+),score=37.46,Snf7|PF03357.17|1.8e-13,Snf7|PF03357.17|1.3e+02 R_Transcript_116229:262-876(+)
MGNTEKLMNQIMELKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRKRTEQMNYLRLASRLDAVVARLDTQAKMQTIGKSMSSIVKSLESSLNTGNLQKMSETMDQFEKQFVNMEVQAEFMESSMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQAAGHAIAAPTASEKVDEDDLSRRLAELKARG*

Click here to download the sequence:
Link to NCBI Protein BLAST