Transcript Information: R_Transcript_116330.p1


Annotated TAIR IDAT1G44910.1
Annotated Gene Namepre-mRNA-processing protein 40A
Annotated Gene Symbol(s)ATPRP40A, PRP40A
Annotation TypeHomolog
Chromosome Positionchr1:16975930-16982818 | Forward length=958
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1267259848592
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 11.81376777387
Replicate 21.1042410785771
Replicate 30.67228187482915
Condition 3: 24 Hour
Replicate 11.9840080320238
Replicate 20.81686144039175
Replicate 31.3510928819072


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116330.p1 GENE.R_Transcript_116330~~R_Transcript_116330.p1 ORF type:3prime_partial len:81 (-),score=10.06 R_Transcript_116330:3-242(-)
ATGGCAAATAATCCTCCTCCATCTGCTCCACAGCACCTTCGACCACCTGCAATGGGTGCTCCTCAAAATTTCGGGCAGGTATGTTTTTGTTATTTCCTAGTTTATTTTGGTGATTGTAATAGTGTTATTCTTTTAATATGCAAGCCGGTTCTGCAGTTTCGGCCAATGGTCCAAGGACAGCAAGGGCAGCCATTTTTACCTGGATCTTCGCAACAGTTTCCGCCAGTTGGACAGAACATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116330.p1 GENE.R_Transcript_116330~~R_Transcript_116330.p1 ORF type:3prime_partial len:81 (-),score=10.06 R_Transcript_116330:3-242(-)
MANNPPPSAPQHLRPPAMGAPQNFGQVCFCYFLVYFGDCNSVILLICKPVLQFRPMVQGQQGQPFLPGSSQQFPPVGQNM

Click here to download the sequence:
Link to NCBI Protein BLAST