Transcript Information: R_Transcript_116342.p1


Annotated TAIR IDAT3G17675.1
Annotated Gene NameCupredoxin superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6042244-6042781 | Reverse length=106
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.430263402696
Replicate 29.4783299022146
Replicate 39.6862776120873
Condition 2: 8 Hour
Replicate 18.5350729244683
Replicate 29.0721292041382
Replicate 39.8537314796386
Condition 3: 24 Hour
Replicate 14.3291865057956
Replicate 25.6713522861485
Replicate 35.1279765266445


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116342.p1 GENE.R_Transcript_116342~~R_Transcript_116342.p1 ORF type:complete len:175 (+),score=11.09,Cu_bind_like|PF02298.13|4e-21,Cu_bind_like|PF02298.13|6.2e+03 R_Transcript_116342:242-766(+)
ATGTGTGTAAGCAAGACATCTAAATGCTATTCCACCATGTCCAATTATATCATCATTTTCTGCTGTTATTCCTTCTTCTTGTGCATTGCTAAATCTGAAGTTATTCCGGTAGGTGGTGACAATCGTTGGACGGATGGCTTCAACTATGTTTCTTGGGCCGACCAATTCAATTTCACTGTGGGTGATGTTCTTGTATTTAGCTACACAAAAGGAAGACACAATGTATACGACGTAAGCAAGGCTGCATTTCAATCCTGTAATCCCAGTGATGGAGTTAATAACATGTATAACAGTGGAAATGATCGTCTGGAGCTCAAAGAGGCCAAGCAATATTGGTTCATCTGTACTCTGGATTCACATTGTTCCTTGGGTATGAAATTTGGCATAAATGTTTCAGCATTTGACATGAATATTACCAACACACCCAACTATTCTAATTTTGCCTCAACCATAAGCTTCCATACTTTAGGGATTTACCTCCTCACAGCCGGGATTTTTTTGTCAACTCTATTTGTAACTTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116342.p1 GENE.R_Transcript_116342~~R_Transcript_116342.p1 ORF type:complete len:175 (+),score=11.09,Cu_bind_like|PF02298.13|4e-21,Cu_bind_like|PF02298.13|6.2e+03 R_Transcript_116342:242-766(+)
MCVSKTSKCYSTMSNYIIIFCCYSFFLCIAKSEVIPVGGDNRWTDGFNYVSWADQFNFTVGDVLVFSYTKGRHNVYDVSKAAFQSCNPSDGVNNMYNSGNDRLELKEAKQYWFICTLDSHCSLGMKFGINVSAFDMNITNTPNYSNFASTISFHTLGIYLLTAGIFLSTLFVTS*

Click here to download the sequence:
Link to NCBI Protein BLAST