Transcript Information: R_Transcript_116452.p1


Annotated TAIR IDAT1G22310.2
Annotated Gene Namemethyl-CPG-binding domain 8
Annotated Gene Symbol(s)MBD8, ATMBD8
Annotation TypeHomolog
Chromosome Positionchr1:7881714-7883644 | Reverse length=524
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2738682956048
Replicate 21.0938050046996
Replicate 32.1272395049655
Condition 2: 8 Hour
Replicate 12.024312730633
Replicate 21.9499296735802
Replicate 31.8089940369129
Condition 3: 24 Hour
Replicate 12.8599759853312
Replicate 20.9241727960944
Replicate 32.7762434030946


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116452.p1 GENE.R_Transcript_116452~~R_Transcript_116452.p1 ORF type:complete len:883 (+),score=198.53,MBD|PF01429.15|4.9e-07 R_Transcript_116452:152-2800(+)
ATGGCAGTAACAGCTGCAGACCCACCAATAATCCTACACCCGAACCTCCTATCAACCATAGACATGTCCTCGCTCTCTCAATCCGAGCTCCACTCTCTCTCTATCCTCTCCAACACCAACACTCCCACTCCCACTCCCTCAAACGACACAGTTTTCCCACCCCCACCCCTCAACCCTACCTCCTTCAACGAAAGCCTCAGCGGCCACACTCAAACCTACTCCACCTCCCCCAACAAAAAACGACGGCGTCCACTCCACCCCCTCAATTCCTCTCTCCTCAAAACGGAGCGTTCCGAGTCCACCTCCATCGTGAACTTCCTCAAACACCACCTCCCCTTCAAGCCCAACAAGAAGAGAGAGAAAGCGAAAGCTGACGTGGCGGTGGAGATTGTGAACAGAAACGGGGTGGTGGTGGACCTGGCGGCGTTGGAAAAGGAGGAGAGAGAAAATGAGGGTGGGCCGTACGGTGGAGAGTTGAGAAGGAGAGCGGAAGGGATGGAGAGAGAAGAAGAGTTGTTGGAGATGTTGGGGAGAATGGAAGGGAAGTGGTGTAGTAGAAGGAAGAAGAGGAGAATTGTTCAGGCTTGTTTGTTGGGGGATTCTTTGCCTGTTGGTTGGAAGTTGATCATCGCTCTCCGGCGAAAAGGTGGCCGGTTTTCCCCCTATTGTCGCCGTTATCTCAGTCCAACAGGAGAGCAACTATCATCTTGCAAGGAGGTCGCAGCATATTTACAATCTTATTTTGGGATAAATGATGCAAATTTTGTAAGGGATAGTCGGGGTGAACCTCAGCAGCAACACACAGTAGATAATGAACCTTGCCTAAACTCTCAAGAAGAAAACTATGTGCTGGACATCTCCAATTCAACTGTTCCAAGTACATGTGTACCTTTTGACCATGAGAAGATTGTTTCTGCTTTGGGAATTGATAATCTGATAGAAGTTCAAGTTCGTGACCTCTATGAATGTCACTCATGTAATGTAAATTTTGATGTAAAGGACAAATATTTGCAGCACTTGCTGTCATCTCATCCAAAGACAACGAGACAATACAGTCTTGGTTCATTGGAAAGACTAGGGGCAACTATTAAAGACACACAAGTTAGTAGCCAGATTACTCCAAGAATTTTTGAAGAGAATTGCCGCCACCTTGGTCATGTAGGAGACCATGTGAAGGACTCTGTCAGACACTCTGAAGGTTCTACTCAACTGACTGACAGAGCAAGGTCGCCTTGCATGGATAGCTCACCTAACAGTACCTCCATCTTGAGAATTGATTCCTTGATTGAAATTACCCAAGGTTCAATCCAGGAAATGTCTCCTAATGTGCTTGAGAAGGAACTTTCAGGTCTCAGCAATGGCATCAAGCTTACCATGCTCCAAAATTCACTCAAGGATGTCAATTTCAACCCTGAAAAGAATTCAAGTACCTGTCCCAATGAAGAAAGGGGAAGTGGGGAAGGTAAAGCTTCATGTAAAGAGTTAAATCCTTGTGATAAAGTGAGTGACATATCGAATGCTTGTCATACTGAAATTGAAATGCAAAAGGATGGTGCGGAAGTTGAAACTTCATCAGTAGAGTCAGGTCCACCAGAGGGTAAGGCGGGTGAGATGTCATTGACTGATGGACATATTAATATGTCAGCTGCTTGTCCCATTGTTCTTGAGAAGGACAAAGACATTGATGAAGACAAAGGTTCATCCATAGAGTTAAGTTTTTGTGGTGAGGTCAAGGAAATAGCAGAGACTAATGGAAATAAAGTTGGCTCAACTATTTCTCCTGTTGAAGTTGAAGTGGAAAAGTCTGATTGGGATGACGAAACTTTGATTGAAGATTTCAACTCTCATGATAATGTGGATCCTTTAATGATTGATTCTGATAGAGAGCATGCTTTTACCTGCAATGTAGTAGATTCTCCAGAGAATTTGGACTTTGAAGCAATGGAAGTGCCTGCTGGTGAAAGTGGCCTTTATGTTGCAAACGCTAGTGGGAGTGGCAGATGGAAATCTACCATTGAACCTGAGGGATCTGCTGATAATAAAGGAGTGTTGAACATCCCCCATCCATTTTGCAATAAGACAAGCTCTCATCTGGATGGTGCTGACGAGAAGATTCATTTTGACTACATGGATAAACTTGCCCCTGAACATGCGCTTGAATCTGACAGACAACCTGCAAATGTTTTGGGTGAAAATCGTGCTTCGGGCTATACTGTGCCTCAAATGTCATTGAACTCATCATCAGTATTTGATGAGGTATTAGAAAAGGCTGGACAGAATATTTGTGGTTGTGATGGGAATCTTGAAAGTGTGATTGGGCCTGGGTACATGGAGTTGGATGTTATAGAATCTCAGATGTATAAAGCTTCCATCTCCCTCTCTGATGCATCAATGGATTTAGAAAATCATACTGGCCTAGGGCTGGGGGTTGATGCCTCTCATGGATCTCAATCAGAGTTTCAACTAAATATAGCGGACAGAGGTCTGACAACAACTTTCTGTGTTTGGTGTGGGGTAGAGTTCTGTCATGAGGTGGTTGACATAGAACCCCAGGCAGATTCTGTCGGTTTCATGTGTCCAGCTTGCAGGACAAAGATCTCCAAGCAATTCAGTGAACTGGAATTTAACTTCTCCTTGGATCCTCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116452.p1 GENE.R_Transcript_116452~~R_Transcript_116452.p1 ORF type:complete len:883 (+),score=198.53,MBD|PF01429.15|4.9e-07 R_Transcript_116452:152-2800(+)
MAVTAADPPIILHPNLLSTIDMSSLSQSELHSLSILSNTNTPTPTPSNDTVFPPPPLNPTSFNESLSGHTQTYSTSPNKKRRRPLHPLNSSLLKTERSESTSIVNFLKHHLPFKPNKKREKAKADVAVEIVNRNGVVVDLAALEKEERENEGGPYGGELRRRAEGMEREEELLEMLGRMEGKWCSRRKKRRIVQACLLGDSLPVGWKLIIALRRKGGRFSPYCRRYLSPTGEQLSSCKEVAAYLQSYFGINDANFVRDSRGEPQQQHTVDNEPCLNSQEENYVLDISNSTVPSTCVPFDHEKIVSALGIDNLIEVQVRDLYECHSCNVNFDVKDKYLQHLLSSHPKTTRQYSLGSLERLGATIKDTQVSSQITPRIFEENCRHLGHVGDHVKDSVRHSEGSTQLTDRARSPCMDSSPNSTSILRIDSLIEITQGSIQEMSPNVLEKELSGLSNGIKLTMLQNSLKDVNFNPEKNSSTCPNEERGSGEGKASCKELNPCDKVSDISNACHTEIEMQKDGAEVETSSVESGPPEGKAGEMSLTDGHINMSAACPIVLEKDKDIDEDKGSSIELSFCGEVKEIAETNGNKVGSTISPVEVEVEKSDWDDETLIEDFNSHDNVDPLMIDSDREHAFTCNVVDSPENLDFEAMEVPAGESGLYVANASGSGRWKSTIEPEGSADNKGVLNIPHPFCNKTSSHLDGADEKIHFDYMDKLAPEHALESDRQPANVLGENRASGYTVPQMSLNSSSVFDEVLEKAGQNICGCDGNLESVIGPGYMELDVIESQMYKASISLSDASMDLENHTGLGLGVDASHGSQSEFQLNIADRGLTTTFCVWCGVEFCHEVVDIEPQADSVGFMCPACRTKISKQFSELEFNFSLDPH*

Click here to download the sequence:
Link to NCBI Protein BLAST