Transcript Information: R_Transcript_116485.p1


Annotated TAIR IDAT4G00980.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:422732-424580 | Reverse length=488
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3000684440683
Replicate 21.734737071432
Replicate 31.957840820184
Condition 2: 8 Hour
Replicate 11.604486876885
Replicate 23.376429451803
Replicate 33.4131233645172
Condition 3: 24 Hour
Replicate 10.98110287297881
Replicate 20.81686144039175
Replicate 31.6213114582887


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116485.p1 GENE.R_Transcript_116485~~R_Transcript_116485.p1 ORF type:5prime_partial len:351 (+),score=52.33,UBN2_2|PF14227.2|3e-19,UBN2|PF14223.2|4.4e-19,UBN2_3|PF14244.2|1.3e-12,zf-CCHC|PF00098.19|5.9e-08 R_Transcript_116485:3-1055(+)
AGAATTGAAAAACTACGTCATTATACTTTTTTTTCTTCCCTAAAAAACTTGAACCAAAGAATCAGTGGAAGTGTGTGTAAACTTTTGGATTGTGACATAGCATTTCCAGTTCTAGTAATTGAAAATCCGATAACGACTGCGGCGTGTGATTCAAGCAAATTCCTGTATTGTCTAGTGATTATTCACAAAGAAATGGCTGCATCTAATAGCATTGTTGCTGGCCTCAATCAAGGGGAGAAAATGACTGATAGCAATTACGATATATGGCATCGTAAAATGCAGTTTCTCATCGAGGAGCAAGATATGCTGGCAACCGTTACACAGCCTATGCAGGAGCCTGAGTCGGGCACCACCGCACAGCATAGGCGAGACCAAGAGGCCTATCAATCCTACAAGAACAAGAATCGTGTTGCTCGCATTGTGTTGCTAAGTAGCATGAGAAACGATCTTTTGTTGCATTTTGTGAGATACAGGACAGCAAAAGAAGTCTGGGATGCTGTAAGACTTCAATATGGTGGTACTTCTACCACTAGGTTGCGCTCTCTTAATCTAAGGTTTGATGGCTATAAGAAGCGTCATGATCACTCAATGAAGCAGCATCTTACAGTCATGTCAAACATGATAGCAGAGTTGAGCGCTACGGGCCGTGAACTTAGTGATGAAGATCAGGTCCAGGCTGTCATTAGATCCCTTCCTAATAAGACATGGGAGCATATGCGTGTTAATCTTACTCACAATGATAATATTAAGACTTTTGATGATGTGTCCCGCCACCTTGAACTTGAAGAGGACCGTCTTATGTCCGAACAAAATGCTGCAGAGGTGTATATGGTGGAATCGAGTGGACACAAGTACAAGCGCAACAAAGGTAAAGGTGGTCCTAAATCTGGAAAGGACAATAGGTTGGGGGCTAAGAAAGGTAATTTCGCCAAGCGCAAGAGAGGAAAGCATGGTGGCAAGAAGGACAAGTCTAAAGTGAAGTGTTATAATTGTGGCAAGTTTGGCCATTTTGCTCGTGAGTGCACTGAGCAAAAGGAGCCACAGACCACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116485.p1 GENE.R_Transcript_116485~~R_Transcript_116485.p1 ORF type:5prime_partial len:351 (+),score=52.33,UBN2_2|PF14227.2|3e-19,UBN2|PF14223.2|4.4e-19,UBN2_3|PF14244.2|1.3e-12,zf-CCHC|PF00098.19|5.9e-08 R_Transcript_116485:3-1055(+)
RIEKLRHYTFFSSLKNLNQRISGSVCKLLDCDIAFPVLVIENPITTAACDSSKFLYCLVIIHKEMAASNSIVAGLNQGEKMTDSNYDIWHRKMQFLIEEQDMLATVTQPMQEPESGTTAQHRRDQEAYQSYKNKNRVARIVLLSSMRNDLLLHFVRYRTAKEVWDAVRLQYGGTSTTRLRSLNLRFDGYKKRHDHSMKQHLTVMSNMIAELSATGRELSDEDQVQAVIRSLPNKTWEHMRVNLTHNDNIKTFDDVSRHLELEEDRLMSEQNAAEVYMVESSGHKYKRNKGKGGPKSGKDNRLGAKKGNFAKRKRGKHGGKKDKSKVKCYNCGKFGHFARECTEQKEPQTT*

Click here to download the sequence:
Link to NCBI Protein BLAST