Transcript Information: R_Transcript_116690.p1


Annotated TAIR IDAT3G01480.1
Annotated Gene Namecyclophilin 38
Annotated Gene Symbol(s)CYP38, ATCYP38
Annotation TypeOrtholog
Chromosome Positionchr3:188569-190674 | Forward length=437
E-Value5.1E-232
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4174045840333
Replicate 21.9423890252963
Replicate 34.0868849015162
Condition 2: 8 Hour
Replicate 11.6719423201863
Replicate 21.1820730488733
Replicate 31.5592793264209
Condition 3: 24 Hour
Replicate 12.1238500078493
Replicate 21.5059758273302
Replicate 32.6033833768556


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116690.p1 GENE.R_Transcript_116690~~R_Transcript_116690.p1 ORF type:complete len:454 (+),score=107.68,Pro_isomerase|PF00160.17|1.6e-24 R_Transcript_116690:58-1419(+)
ATGTCTTCTATTATGTACCACCATTGCTGTCCTTCAATCAGCAGCTCAAAACTTTCCTTCCCCAAATCCCCAACTACATTTCTTAATCCGGGTTCGGCTAATTGTCCCAAAAATGTTCGTTTTCGGAAGTGGGGTCCTCATTGTTGCTCCAATGACTCGCGTCAGATTGTTTTCAATGACCCACAAAAAAAGAAGCCCTTTTCGTTGAAAGAATGTGCCATTTCGATTGCATTAGCAGTTGGGTTAATAACTGGATCGCCTGCTTTGAATTGGCAAACTGATGCCGTAGCAGTTACTACTCCCCCAGCACTGCCAGATTTGGCTGTTCTAATCTCTGGTCCACCAATCAAGGATCCAGGAGCCCTTTTGAGATATGCATTGCACATTAACAATAAGGCTATTAGAGAAGTTCAGAAACCGTTGGAAGATATCACGGATAGTCTCAGGGTTGCAGGACTTAAAGCTCTTGATTCTGTTGAGAGGAACATAAAGCAGGCTTCTCGTGCACTTAAGAATGGCAAGAATGACATAATTTCAGGATTGGCTGAATCAAAGAAAGACCGTGGGATTGAGTTGCTCGACAAGTTGGAAGCTGGACTGGGTGAACTTCAACAGATTGTGGAGGACAGGAATCGGGATGGGGTTGCACCTAAACAGAAGGAGTTGCTTCAATATGTTGGCAGTGTTGAAGAGGACATGGTTGATGGATTTCCATATGAAGTTCCGGAAGAGTACCAAAGTATGCCTCTCTTGAAGGGAAGGGCCACTGTAGATATGAAGGTCAAAGTGAAGGACAATCCAAATCTTGAAGACTGTGTCTTTCGCATTGTGCTGGATGGTTATAATGCCCCAGTAACTGCTGGCAATTTTGTGGATTTGGTGCAAAGACACTTTTATGATGGCATGGAGATCCAAAGAGCTGATGGCTTTGTTGTGCAAACTGGAGATCCAGAAGGTCCTGCCGAGGGATTTATTGATCCCAGTACAGAAAAACCTCGTACAATTCCATTGGAAATCATGGCGGAAGGAGAAAAAACTCCATTTTATGGGTCAACCTTAGAAGAGCTTGGTTTATACAAGGCTCAAACAAGGCTTCCATTTAATGCCTTTGGTACGATGGCCATGGCGAGAGAAGAATTCGAGAATAATTCTGGTTCCAGCCAGATATTTTGGTTGTTGAAGGAAAGTGAACTAACGCCCAGTAACGCCAACATATTGGATGGCCGATACGCAGTGTTTGGTTATGTAACAGATAATGAAGATTTTTTGGCAGATCTCAAGGTTGGTGATGTCATAGAGTCCATGCAGGTTGTCTCTGGCCTTGATAATCTTGTGAATCCAAGCTACAAGATTGCTGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116690.p1 GENE.R_Transcript_116690~~R_Transcript_116690.p1 ORF type:complete len:454 (+),score=107.68,Pro_isomerase|PF00160.17|1.6e-24 R_Transcript_116690:58-1419(+)
MSSIMYHHCCPSISSSKLSFPKSPTTFLNPGSANCPKNVRFRKWGPHCCSNDSRQIVFNDPQKKKPFSLKECAISIALAVGLITGSPALNWQTDAVAVTTPPALPDLAVLISGPPIKDPGALLRYALHINNKAIREVQKPLEDITDSLRVAGLKALDSVERNIKQASRALKNGKNDIISGLAESKKDRGIELLDKLEAGLGELQQIVEDRNRDGVAPKQKELLQYVGSVEEDMVDGFPYEVPEEYQSMPLLKGRATVDMKVKVKDNPNLEDCVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRADGFVVQTGDPEGPAEGFIDPSTEKPRTIPLEIMAEGEKTPFYGSTLEELGLYKAQTRLPFNAFGTMAMAREEFENNSGSSQIFWLLKESELTPSNANILDGRYAVFGYVTDNEDFLADLKVGDVIESMQVVSGLDNLVNPSYKIAG*

Click here to download the sequence:
Link to NCBI Protein BLAST