Transcript Information: R_Transcript_116796.p1


Annotated TAIR IDAT1G79740.1
Annotated Gene NamehAT transposon superfamily
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:30004367-30006715 | Reverse length=651
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3500710765324
Replicate 20.99390771201411
Replicate 31.5587424991465
Condition 2: 8 Hour
Replicate 11.0866508112683
Replicate 20.79387746181724
Replicate 32.0407136200435
Condition 3: 24 Hour
Replicate 11.9018301845435
Replicate 21.1745404142911
Replicate 30.8418347956499


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116796.p1 GENE.R_Transcript_116796~~R_Transcript_116796.p1 ORF type:complete len:338 (+),score=41.24,DUF659|PF04937.11|1.4e+03,DUF659|PF04937.11|4.7e-45 R_Transcript_116796:890-1903(+)
ATGTCTTCTCCTTCCAGTACCCAAGACACAAGCCATACCCAAAAATTAGATCTTGAGCGAAACCCGCTATGGAGGCATGTAACCATTATTTCATCACCTAAGGGAGGAGGAGGAAATAGAGTGTGGATGTGTTCTTACTGTAATAGAACCTTCACAAGTTCATATTCCAAAGTGAAGGCTCATCTCCAAAAAACTCCCAAGCAAGGAATTACTTGCTGCCCCTCTATACAAGATGATGTTAGGAAGATGCTAGTAAAGGAGCAAAACCAAGCAGATCAGAAGAAAGCCATATCAAAATCAAATGCTGTGATGAAAGCTGAGTACCTAACACTGCCTCTAGGTTCTGACTTGCTCCAACATAAAAAAAGAAAAGGTAACTGTTCTTCAACCATTGAGCGGGCTTTTAATATCCAAGAACGTGATGAAATTGATAAAGAAATTGCTCGTGCATTTTATACTGGTGGAATTTCATTCAATTTTGTCAAAAATCCTTACTTCCGAAAATCCTTAGTAAGGTTAGGCAATAGTAATCTTGCTGGATATTGTCCCCCTACTATAAATAGGATGAGGACAACTTTGCTTTCACAAGAGAAATCACATGTGCTGAGACTTTTACAACCATTCAAAAACACTTGGAATAGAAGAGGGGTTTCTCTATGTTCTGATGGGTGGGGGGATTTGCAAAAAAGGCCTTTGATAAACATAATGGCTGCTTCAGGTGGACAATGCATGTTTGTTAAGGCATTAGATACAACCGGAAACATCAAGAACATAAATTATGTTGCTGAATTGTTTGTGTCAGTTGTTGAAGAGATAGGACCAGATAATGTGGTGCAAATTTGTACTGATAATGTTGGGAATTTTAAAGGGGCAGGATTAGCGGTAGAGAAAAAATATCCCCATATTTTTTGGACCCCCTGTGTTGTTCATTGTTTGAACTTAGCTTTGAATCCATATGTGAACCCCCTGAGAAATCACACCACTATTATAGATGTGAATGGATTAGAAACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116796.p1 GENE.R_Transcript_116796~~R_Transcript_116796.p1 ORF type:complete len:338 (+),score=41.24,DUF659|PF04937.11|1.4e+03,DUF659|PF04937.11|4.7e-45 R_Transcript_116796:890-1903(+)
MSSPSSTQDTSHTQKLDLERNPLWRHVTIISSPKGGGGNRVWMCSYCNRTFTSSYSKVKAHLQKTPKQGITCCPSIQDDVRKMLVKEQNQADQKKAISKSNAVMKAEYLTLPLGSDLLQHKKRKGNCSSTIERAFNIQERDEIDKEIARAFYTGGISFNFVKNPYFRKSLVRLGNSNLAGYCPPTINRMRTTLLSQEKSHVLRLLQPFKNTWNRRGVSLCSDGWGDLQKRPLINIMAASGGQCMFVKALDTTGNIKNINYVAELFVSVVEEIGPDNVVQICTDNVGNFKGAGLAVEKKYPHIFWTPCVVHCLNLALNPYVNPLRNHTTIIDVNGLET*

Click here to download the sequence:
Link to NCBI Protein BLAST