Transcript Information: R_Transcript_116796.p2


Annotated TAIR IDAT5G33406.1
Annotated Gene NamehAT dimerisation domain-containing protein / transposase-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:12676126-12678403 | Reverse length=509
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8774474124854
Replicate 20.83985201665192
Replicate 31.3089564340658
Condition 2: 8 Hour
Replicate 12.0987884240496
Replicate 20.89443527364742
Replicate 31.2446818711123
Condition 3: 24 Hour
Replicate 12.2301869878341
Replicate 21.0082404064264
Replicate 30.62536299105421


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116796.p2 GENE.R_Transcript_116796~~R_Transcript_116796.p2 ORF type:complete len:175 (+),score=26.78 R_Transcript_116796:1948-2472(+)
ATGCCGTGGGCTATATTCAAAAGATATTCTAACCTATCCACATTGAAAGTTTCTGAGACGAGGTTCGCCTCTCATGTTGTTATGGCCCAAAGGATAAGACGTTTGAAGGGAGAACTCCAACAAATTGTTTTTGATCCTGATTGGAAGACTTCTAGAGCAAATAGGTGCCCAATTGAGGCAAGGGCTCGCCTTGTGAAGGAAAAACTTTTGAGTGATAATTGGTGGGATGATTTGGATTATTTTTTGGCTTTCACGAAACCCATAGTCGACATGATAAGGGTAGGAGATACAGATGCTCCAGTTTTGCATTTGATATATGACATGTGGGATACAATGATAGAGAAGGTCAAAGATGTTTTTGAGCATGAAGGAAAAAATTTAAAATCTGATGAGTCAACATTTTTTGAGGCTGTCAGGCTCGTTTTATTGTCTAGGTGGGATAAAAGTAATACCCCTTTGCATTGCTTAGCACACTCTTTGGTACCTAGATATTATAGTGAGAGCTGGTTGCAAGGAGGGAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116796.p2 GENE.R_Transcript_116796~~R_Transcript_116796.p2 ORF type:complete len:175 (+),score=26.78 R_Transcript_116796:1948-2472(+)
MPWAIFKRYSNLSTLKVSETRFASHVVMAQRIRRLKGELQQIVFDPDWKTSRANRCPIEARARLVKEKLLSDNWWDDLDYFLAFTKPIVDMIRVGDTDAPVLHLIYDMWDTMIEKVKDVFEHEGKNLKSDESTFFEAVRLVLLSRWDKSNTPLHCLAHSLVPRYYSESWLQGGR*

Click here to download the sequence:
Link to NCBI Protein BLAST