Transcript Information: R_Transcript_116800.p1


Annotated TAIR IDAT1G64355.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3593 (InterPro:IPR021995); Has 301 Blast hits to 301 proteins in 96 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23886152-23886987 | Forward length=199
E-Value6.3E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.887404845799
Replicate 24.5893552822509
Replicate 35.132110608974
Condition 2: 8 Hour
Replicate 14.4154838429459
Replicate 26.8426742246251
Replicate 38.2326977130717
Condition 3: 24 Hour
Replicate 15.1435524389938
Replicate 23.8566572923414
Replicate 35.7410372949239


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116800.p1 GENE.R_Transcript_116800~~R_Transcript_116800.p1 ORF type:complete len:183 (+),score=29.35,DUF3593|PF12159.4|3.2e-38 R_Transcript_116800:189-737(+)
ATGAATGCAATCAATTGTGTATTCTCTATTCAGAGCTGCTCAATCCCAACCTCTTCCTCTTCAACACTTGCAATCCCATCAACACCATTTCTGAAGGGTATCCAGATAATGAAAAGAACAAGCCTTCAAACCAAATTCAAAGCTAAAATAACCAGAAGAACAGGAGCAAGAACAAGGGGATTGATTCTCTGTGGTTTCCTTCCGGTAGACCCTTGGGCACCCAACATCGATTCTCAGAGTATAGCTACTCAATTTTTTGCTTTGTCTCTCTTCCCTTATCTGGGTTTTCTCTACTTCATCACCAAGTCCAAATCTACTCCCAAGCTCACCCTTTTTGGTTTCTACTTCTTGCTTGCCTTTGTGGGTGCCACTATTCCTGCTGGAATCTATGCCAAGGTTCACTATGGAACTTCCTTGTCTAACGTGGATTGGTTGCATGGAGGGGCTGAGTCGCTGCTCACTCTATCAAATTTATGTGTCGTGCTGGGGCTGAGGAAAGCTGTGAAGGAATCTAGAGATTCCGAAGAAAAACAATCTGATGGCATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116800.p1 GENE.R_Transcript_116800~~R_Transcript_116800.p1 ORF type:complete len:183 (+),score=29.35,DUF3593|PF12159.4|3.2e-38 R_Transcript_116800:189-737(+)
MNAINCVFSIQSCSIPTSSSSTLAIPSTPFLKGIQIMKRTSLQTKFKAKITRRTGARTRGLILCGFLPVDPWAPNIDSQSIATQFFALSLFPYLGFLYFITKSKSTPKLTLFGFYFLLAFVGATIPAGIYAKVHYGTSLSNVDWLHGGAESLLTLSNLCVVLGLRKAVKESRDSEEKQSDGI*

Click here to download the sequence:
Link to NCBI Protein BLAST