Transcript Information: R_Transcript_116803.p2


Annotated TAIR IDAT1G73630.1
Annotated Gene NameEF hand calcium-binding protein family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:27684748-27685239 | Forward length=163
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9236698000847
Replicate 25.3657212174984
Replicate 37.6355791987175
Condition 2: 8 Hour
Replicate 13.808912325127
Replicate 26.7082645523557
Replicate 34.8404294987699
Condition 3: 24 Hour
Replicate 15.6119084334388
Replicate 24.1659933459979
Replicate 312.403032655909


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116803.p2 GENE.R_Transcript_116803~~R_Transcript_116803.p2 ORF type:complete len:90 (+),score=26.07,EF-hand_1|PF00036.28|3.9e-08,EF-hand_1|PF00036.28|19,EF-hand_6|PF13405.2|1.9e-08,EF-hand_6|PF13405.2|2.5e+02,EF-hand_7|PF13499.2|4.9e-09,EF-hand_5|PF13202.2|1.4e-05,EF-hand_5|PF13202.2|6.2,EF-hand_8|PF13833.2|7e-05,EF-hand_8|PF13833.2|8.3 R_Transcript_116803:625-894(+)
ATGTGTACACCAGAGTCCAATATGCACAAGGCATCTTTAGATGATGTCCAGCTGAGGGCAATTTTCAAGAAACATGATGTCAATGGTGATGGTCACTTGAATAAGGAAGAATTGAAGGAAGCTTTTCGAAAGCTTGGTTCATTTTTGCCCGGTTGGAGAGCAGATCGTGCCATCTATTATACAGATATTGATATAGATGGAGTTATAAGTCAGGAGGAAATTGATGAGCTAGTGGCTTATGCGGTGGAATGTGGTTATGAACTTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116803.p2 GENE.R_Transcript_116803~~R_Transcript_116803.p2 ORF type:complete len:90 (+),score=26.07,EF-hand_1|PF00036.28|3.9e-08,EF-hand_1|PF00036.28|19,EF-hand_6|PF13405.2|1.9e-08,EF-hand_6|PF13405.2|2.5e+02,EF-hand_7|PF13499.2|4.9e-09,EF-hand_5|PF13202.2|1.4e-05,EF-hand_5|PF13202.2|6.2,EF-hand_8|PF13833.2|7e-05,EF-hand_8|PF13833.2|8.3 R_Transcript_116803:625-894(+)
MCTPESNMHKASLDDVQLRAIFKKHDVNGDGHLNKEELKEAFRKLGSFLPGWRADRAIYYTDIDIDGVISQEEIDELVAYAVECGYELD*

Click here to download the sequence:
Link to NCBI Protein BLAST