Transcript Information: R_Transcript_116829.p1


Annotated TAIR IDAT1G79160.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29779862-29780668 | Reverse length=239
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.86404548898077
Replicate 21.3666231040194
Replicate 31.7620567381656
Condition 2: 8 Hour
Replicate 13.3323958212227
Replicate 23.175509847269
Replicate 33.7592093000801
Condition 3: 24 Hour
Replicate 11.9018301845435
Replicate 21.5660538857215
Replicate 31.942695682269


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116829.p1 GENE.R_Transcript_116829~~R_Transcript_116829.p1 ORF type:complete len:169 (+),score=26.15 R_Transcript_116829:145-651(+)
ATGATGTCCCCTAAATTTTGTGGCCTAAATTCCAATCCACAACAATCATTACCATCAAGTTTAAAACCAACTCTAAATTTATTAGAAGACACAAGCTTAGACCTAAAGCTAGTGTCAAATTGCTCACCCTCTAGTTACACAAGTGTGTGCACCTTAGACAAGGTGAAGTCAGCCTTAGACAGAGCAGAAAGAGCATCACCCTCTTTGTCCACCACCACTTCTTCTTCTTCTTCATCAAAGAAGCGTTTCATGGGGGCCCCACCAATGGTGAGATCGCCCTCCGAGTCATCATCTTCCTCATCAATGTCGTTCAAAGACGTTGAAGATGATGATGAGAGATGGTCGTCCGATCAAAGTGGGGACTTAATGGTGGCCACAGCTTGTCCCGGTTGCTTGCTCTATGTGTTGATTTCAAAGAATGATCCTAAATGCCCCAAGTGCAATTCTCTTGTCCAATTGCCTATGGTCACTAAGAAGCCCAAGATTGATCTTAATATGTCAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116829.p1 GENE.R_Transcript_116829~~R_Transcript_116829.p1 ORF type:complete len:169 (+),score=26.15 R_Transcript_116829:145-651(+)
MMSPKFCGLNSNPQQSLPSSLKPTLNLLEDTSLDLKLVSNCSPSSYTSVCTLDKVKSALDRAERASPSLSTTTSSSSSSKKRFMGAPPMVRSPSESSSSSSMSFKDVEDDDERWSSDQSGDLMVATACPGCLLYVLISKNDPKCPKCNSLVQLPMVTKKPKIDLNMSI*

Click here to download the sequence:
Link to NCBI Protein BLAST