Transcript Information: R_Transcript_116830.p1


Annotated TAIR IDAT1G79160.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29779862-29780668 | Reverse length=239
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.67247750885806
Replicate 20.22101368859261
Replicate 30.48224710728742
Condition 2: 8 Hour
Replicate 10.90211081384588
Replicate 20.35306655538714
Replicate 30.66874354917215
Condition 3: 24 Hour
Replicate 10.72498338613802
Replicate 20.23216061990081
Replicate 30.34559533716154


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116830.p1 GENE.R_Transcript_116830~~R_Transcript_116830.p1 ORF type:3prime_partial len:190 (+),score=42.29 R_Transcript_116830:652-1218(+)
ATGGCAGCAGATGTGAGTAGACAACAAATAAAGGACGAGTCAAATTGTGGATTGATAACTCATGATTTTCTGGGTCTGGGTGGATGTTATGAGAAAGAGAAACAAATTGAATCCAAAGAGTTAGACTTGGATTTGCATGTTCCTTCTGGCTGGGAAAAGCGTCTTGACCTCAAGTCAGGAAAAGTATACTTGCAAAGATGCAATCCTTCAAATGCACCCCCTTGTGATGAAAGGAATTCTGCAAACGTGATGTCTTCTCAATTTTATGACTTAAATTCAAATGCACAACAAGCATTACCATCATTAATGTCATCAAGTGTAAAACCAACCCTTAATTTGCTTGAAGACACAAGCTTAGATCTAAAGCTAGTGTCAAATAATAGTTCAACCTCGAATTACACAAGTGTATGCACTTTAGACAAGGTGAAGTCAGCCTTAGACAGAGCAGAAAGAGCATCACCCTCTTTGTCCACCACCACTTCTTCTTCTTCTTCATCAAAGAAGCGTTTCATGGGGGCCCCACCAATGGTGAGATCGCCCTCCGAGTCATCATCTTCCTCATCAATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116830.p1 GENE.R_Transcript_116830~~R_Transcript_116830.p1 ORF type:3prime_partial len:190 (+),score=42.29 R_Transcript_116830:652-1218(+)
MAADVSRQQIKDESNCGLITHDFLGLGGCYEKEKQIESKELDLDLHVPSGWEKRLDLKSGKVYLQRCNPSNAPPCDERNSANVMSSQFYDLNSNAQQALPSLMSSSVKPTLNLLEDTSLDLKLVSNNSSTSNYTSVCTLDKVKSALDRAERASPSLSTTTSSSSSSKKRFMGAPPMVRSPSESSSSSSM

Click here to download the sequence:
Link to NCBI Protein BLAST