Transcript Information: R_Transcript_116840.p1


Annotated TAIR IDAT4G38060.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:17873709-17874379 | Reverse length=136
E-Value7E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1201104377586
Replicate 23.3347065367062
Replicate 35.3898206108594
Condition 2: 8 Hour
Replicate 13.8889314916213
Replicate 26.8397991514215
Replicate 37.3674184282747
Condition 3: 24 Hour
Replicate 16.6172503185735
Replicate 25.4489463141426
Replicate 36.3088089979881


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116840.p1 GENE.R_Transcript_116840~~R_Transcript_116840.p1 ORF type:5prime_partial len:170 (-),score=52.20 R_Transcript_116840:384-893(-)
TCTTCTACTTCTTCTGCTCCAAGGAAGATTAAGAAGAAATGGCAAAGTAGGGAAGAAAGGAAGATTGATAGAGAGCATGATGTGGTTGTGGTCCCAGCTGATGGGGTTTGCTTATCTGGGTCCGAATCCGAGGACTCAGATTGGTCCATTGGGTGGTTGGAGCCCCATGGCCCTGATTTCTTGAGTGATGATGAGACTGATGACAGCTTTGCAGTTCTGGTTCCATGTTATAGAAATGATAGAAGGGGGCTGGTTGAAGGGCCTAGTAACCAACTTCTCAATGCTCTTCAAAATCTCACTAATGAGCATTTGACTGCCAAACTGGAGCTTTCTTCTGAGGATGGTTGCCTAATCTGTAGTTATGTTACAGCCAAGGCTTTTAATGCCTTCTTAACTGCAGTATATTGCATAGTCAGAAGGGAAAAACGTGATGGAACAGTGGCTCTCTTCACTGCAGAACTTCTGAAGCTTGTTGTGTTTGACCAAACAATTGGATGTAATGCTCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116840.p1 GENE.R_Transcript_116840~~R_Transcript_116840.p1 ORF type:5prime_partial len:170 (-),score=52.20 R_Transcript_116840:384-893(-)
SSTSSAPRKIKKKWQSREERKIDREHDVVVVPADGVCLSGSESEDSDWSIGWLEPHGPDFLSDDETDDSFAVLVPCYRNDRRGLVEGPSNQLLNALQNLTNEHLTAKLELSSEDGCLICSYVTAKAFNAFLTAVYCIVRREKRDGTVALFTAELLKLVVFDQTIGCNAH*

Click here to download the sequence:
Link to NCBI Protein BLAST