Transcript Information: R_Transcript_116882.p1


Annotated TAIR IDAT1G79910.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30055050-30057011 | Forward length=381
E-Value2.6E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3641354642439
Replicate 21.4140365586487
Replicate 32.5711644240579
Condition 2: 8 Hour
Replicate 11.9488749651889
Replicate 22.0535503731701
Replicate 31.7781169587318
Condition 3: 24 Hour
Replicate 11.6866960412191
Replicate 21.4853541701817
Replicate 32.8141334597439


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116882.p1 GENE.R_Transcript_116882~~R_Transcript_116882.p1 ORF type:complete len:490 (+),score=81.39,Ist1|PF03398.10|3.8e-41,Ist1|PF03398.10|3.8e+03 R_Transcript_116882:1298-2767(+)
ATGTTGGACGGATTATTTGGTCGAAGTAATTTCAAAAACAAATGCAAATCGGCTCTGACTCGAACGAAAACCAGGTTGGAGGTGATTAAAAAGAAACGAAATGCAATGCAAAGGTTCCTCAAGAAAGACATTGTTGATCTATTACAGAATGATCTTGAGCGCAATGCCTATGGCCGGGCCGAAGGGTTATACGTCGAGTTGAACCTATCATCTTGTTACGACTATGTAGAACAATGTTGCTCTTGCATGTCAGAGCATCTCAAAGAAATGCAAAAACAAAGTGAGTGCCCTGAGGAATGCAAAGTTGCTGCTGCTTCATTGATATATGCTGCAGCTAGATTTGCTGATCTTCCGGAGCTACGAAATCTGAGGGATCTATTGAATGAGAAATACGTCAAAGCTCTAGAACCATTTGTCAGCAAGGAGTTTGTAGAGAAGTTAAAAGGACAATGTCCGACGATGGAAATGAAGCTTCAGTTGATGCAAGACATTGCACAGGAATTTTCCTTGACGTGGGATCCCCAACCTCTAGAGCAACAACTGCAAAATCCTTCATTAACCACAAATGACAAGTTTCCCAGAAGCAGGTCTAATATAGTTAAGGAAACACAAGTGCAAAGTGACAAACAGAGTGATGAAGACAACAGTGGAGCTAAAATGCGCTACTCACATTCATGTTTAACATTCAGTGATAACCTAGAGGAGCAACGTACCAAGCGAGATCCTGTAATTCCATTTGCTACCTCAAGGAGCGATTCTGAAGATTATGCCAATACAAAGCCCTTTGTTAATAGAATTGTCCCAGCTCCCTATATCATAGCCAGCAAGGAAGATGAAGATAATGAATTTGGATCTAGATACAAAGAGAAGAAAACTAATCACAAGCTGGACATGGAAAAGAATAATGGTTCTGATGAAGGTTCCGTTGGTAGAGTTAGGCCGAGACCTAGATCAGTCAGAACAAAGTTCTTGAAACAATCTCAGAGTACTGTGGTCAGCAGTTCTGAACATGATCATACCGATGTAAAGGAGACCTTGAGCGCAAGAGTTGCAGGAAACACGGGATATGGTCTTAGAACGTATGAGAAAGATACAGACGAAGACATGGAAGATGTGTTCTCGCCAAATTACATGAAAAAGAAGTCACTAAGAACTCCAACTAGTGCAAGGAGTGAAAACTCAAACGCGCAATTAATGTCTGAATTGCCTTTACCTCCAGGCAGAAGAAGGTACCTGTTTCCTGAATCACAGCCAGCATCTCCACTAAAAGAAGCTGATGTTAATGTTAACATTAAATCAGAAGTATTTTCAGGGAAGAGTAAATTTCTGCCACCTGGTGAACAGCCAGTTGAACCAAAACATAGGCATTCCAGATCTTCGTCTTTTCAAAATGATCATGTTCATCCTAAGATGCCAGATTTCGATGAATTAGCAGAAAGGATAGCGGCCTTTAGAAATATAGATGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116882.p1 GENE.R_Transcript_116882~~R_Transcript_116882.p1 ORF type:complete len:490 (+),score=81.39,Ist1|PF03398.10|3.8e-41,Ist1|PF03398.10|3.8e+03 R_Transcript_116882:1298-2767(+)
MLDGLFGRSNFKNKCKSALTRTKTRLEVIKKKRNAMQRFLKKDIVDLLQNDLERNAYGRAEGLYVELNLSSCYDYVEQCCSCMSEHLKEMQKQSECPEECKVAAASLIYAAARFADLPELRNLRDLLNEKYVKALEPFVSKEFVEKLKGQCPTMEMKLQLMQDIAQEFSLTWDPQPLEQQLQNPSLTTNDKFPRSRSNIVKETQVQSDKQSDEDNSGAKMRYSHSCLTFSDNLEEQRTKRDPVIPFATSRSDSEDYANTKPFVNRIVPAPYIIASKEDEDNEFGSRYKEKKTNHKLDMEKNNGSDEGSVGRVRPRPRSVRTKFLKQSQSTVVSSSEHDHTDVKETLSARVAGNTGYGLRTYEKDTDEDMEDVFSPNYMKKKSLRTPTSARSENSNAQLMSELPLPPGRRRYLFPESQPASPLKEADVNVNIKSEVFSGKSKFLPPGEQPVEPKHRHSRSSSFQNDHVHPKMPDFDELAERIAAFRNIDG*

Click here to download the sequence:
Link to NCBI Protein BLAST