Transcript Information: R_Transcript_116892.p1


Annotated TAIR IDAT2G43990.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; Has 1419 Blast hits to 494 proteins in 144 species: Archae - 0; Bacteria - 300; Metazoa - 246; Fungi - 102; Plants - 31; Viruses - 2; Other Eukaryotes - 738 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18211974-18213872 | Forward length=632
E-Value2.1E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0339013635258
Replicate 21.7396934630647
Replicate 32.0616063836537
Condition 2: 8 Hour
Replicate 11.5391115109697
Replicate 21.0541558582273
Replicate 31.7373684450942
Condition 3: 24 Hour
Replicate 14.0668115660504
Replicate 22.9617061938775
Replicate 33.2518875534819


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116892.p1 GENE.R_Transcript_116892~~R_Transcript_116892.p1 ORF type:5prime_partial len:700 (+),score=153.84 R_Transcript_116892:1-2100(+)
CTGAGATCAAACTTCTTCACACATTTCTATTTCTATTTTAGCAGATCTCCCATTTTCCTCCTTTATTACCACTACACAAATTCCCACTCAACTGACCCAAATGTGATAGTCATGATGATGAAGAAGAACACCATTAAACCCTCAACTTTAAAGCTTGCTAACAACAATAATGGAAGTACTACAAGAGAAAAAAGGGAGCAAAAAAAGAGCAGCCCTAGAAGCCCATTGAAGGTGAAAGATCTCAATGTTTCATCTTCATCTTCATGTTCTTCTTGTTCTACTGCAACTACTGCTTCTTCTTCCATTGAAGGTCCAAGAGGTTGTCTCAGGTTCTGTCTCTCTAACCATCATCACTCTTCTTATAAAAATGCTTGTAAAAAGCCTAAATCTTTTGTGCCTAAGACCCCTAAATCAGCCCCTATAGCTAAGAATTTGATGAAAAGAGGCAATAATTTGGAAAACCCAGAAAAACCCACCTCTAGAAAAGGTCAAAAGTTGAGAAAAAACCCTCCTTTGGGTTCAAAATTCAATCTTTCTGGGAAATTATCATCTGGGTCTGAGCTTAAAGTGTTTGATAATGCTGTGTTTACTCCTGTGAATAAAATGGGAAGTGGGTTTAGTGAGGATGGTTTTGTTAGGCATGATAAAGGTTTCAAATTGGGAGAAAAGGACACAAATGGTGGTTCTGATACTTGTAGCCCTACAATTTGTAGCCCTACAATTCCACCTGTTCAGGCTTCAGTGTCACCTGAGATACAAGGCGGTTCGACATCGGTTTTGCCAGCTACACCCACCACTTGTTATGGTGCTGGTTATGTCCTTTCTGGGGTTAGTGATAAGAGGAAATGTAAGCCTAGAGGAATACTTACTATTGGGGATAATGACTTGTTTGGGTCTAGTAAAGCTAAGGTGTTTGATGATAGGGATGGAGATAAGAGTGTTACTGGAGCTTCTCTAGTTATGTCTCCTACTGAGGCTTCAATGCACTGGCTTTTATCTCCTTGTGATGAGAAGCCAAGCCAGGGCCGAGAAGATGGTGGTGATGATGATGGGAGTGGGGTGAGACTTGGCCAATGTGAGGGTTTAGTGCCTTTTAAATCAGTTGGCTGCTCATCCTCTCCTGTTTCTAGTCTTGGGTTTTCGTCCCAGATGTTCAACAACAGTAGTAGTACAATCGCTACTAGTGATGCTACCACTGCTACTACTCATTCTAGCAGGAAAAGCAGGAGTTCTTTTCTGAATGGAGACTCGACCTCTGAGTTTCGAGGCCTTCTGGGGCCTTCGTTCGATCATTTGATTCGTACTCCCTCACCATCTTCTCCTGTTTGCACACCAAGTTGCAAGGCGGATGTCTCACCTGGACAAGGCAAGTATCGGTATGATCATGCAGTGGAAGCTACTCCATACTTGGAGAATTCTACAGGAAGTGGGAATGTAATTCAGACCCCGCAATCAAATTCAAGTTCGCCCAAGCTTGGCTTGTCGAATTTGAGTAGATATGAGATTTCTAGACTTTGGTTTGAATGTGAACTTGATTCTGTGACTGAAGTTCTTCGGAGAGTGAGTTTGTCTCCTGAGCACCAGACACCAATGGATGATTCTCCCAAGACAAGTTTTGAGTTTAATCCCCTAATCAAACCTGCTAGTTCCATTGACTTTACCCTTTTCCGAAATGCTATAGATAGTCAAAGTCCTCCTGGGATTCCTGAATCATTGTTGCACAGTTTACCTGAGTCCGAGGTTAGGATATCATGGAGGGAAGGATTAGCGAGCCGCATGTTTGAAATGGACGAGCTGGACTGCTGTAGGTGCCTCTCAGATGAAGAAGAAGAAGATGCCAATGGCTGTAGCAATCCCTTTGAATCCTTTTCCTTTTCAGAACTTGGAGCTGTTGATTCCAATAAAGTTGCAACCAACACATGTGAGCCAACTATAGTAACTCAGCAGGAAGATATCATTAACCGAAAAGGTGAAGATGGCTTTGGTTCAGAGGGACCTAATCAATGTGAAGAGTCCAAGAGCAACAAAGGAGAAAGTCTACCATCACCAGAGGACTCTAATTGGACTGTATGTTATCAAAATAATTTGTTTCGAGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116892.p1 GENE.R_Transcript_116892~~R_Transcript_116892.p1 ORF type:5prime_partial len:700 (+),score=153.84 R_Transcript_116892:1-2100(+)
LRSNFFTHFYFYFSRSPIFLLYYHYTNSHSTDPNVIVMMMKKNTIKPSTLKLANNNNGSTTREKREQKKSSPRSPLKVKDLNVSSSSSCSSCSTATTASSSIEGPRGCLRFCLSNHHHSSYKNACKKPKSFVPKTPKSAPIAKNLMKRGNNLENPEKPTSRKGQKLRKNPPLGSKFNLSGKLSSGSELKVFDNAVFTPVNKMGSGFSEDGFVRHDKGFKLGEKDTNGGSDTCSPTICSPTIPPVQASVSPEIQGGSTSVLPATPTTCYGAGYVLSGVSDKRKCKPRGILTIGDNDLFGSSKAKVFDDRDGDKSVTGASLVMSPTEASMHWLLSPCDEKPSQGREDGGDDDGSGVRLGQCEGLVPFKSVGCSSSPVSSLGFSSQMFNNSSSTIATSDATTATTHSSRKSRSSFLNGDSTSEFRGLLGPSFDHLIRTPSPSSPVCTPSCKADVSPGQGKYRYDHAVEATPYLENSTGSGNVIQTPQSNSSSPKLGLSNLSRYEISRLWFECELDSVTEVLRRVSLSPEHQTPMDDSPKTSFEFNPLIKPASSIDFTLFRNAIDSQSPPGIPESLLHSLPESEVRISWREGLASRMFEMDELDCCRCLSDEEEEDANGCSNPFESFSFSELGAVDSNKVATNTCEPTIVTQQEDIINRKGEDGFGSEGPNQCEESKSNKGESLPSPEDSNWTVCYQNNLFRV*

Click here to download the sequence:
Link to NCBI Protein BLAST