Transcript Information: R_Transcript_116981.p1


Annotated TAIR IDAT4G00335.1
Annotated Gene NameRING-H2 finger B1A
Annotated Gene Symbol(s)RHB1A
Annotation TypeOrtholog
Chromosome Positionchr4:146866-147962 | Forward length=190
E-Value1.2E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.387891715159
Replicate 211.14495567121
Replicate 312.593277541013
Condition 2: 8 Hour
Replicate 113.46142338332
Replicate 215.79038575515
Replicate 319.442009479656
Condition 3: 24 Hour
Replicate 117.626373321744
Replicate 211.811584145191
Replicate 320.124240328237


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_116981.p1 GENE.R_Transcript_116981~~R_Transcript_116981.p1 ORF type:complete len:211 (+),score=51.82,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|8.6e-12,zf-rbx1|PF12678.3|5.3e-10,zf-C3HC4|PF00097.21|1e-08,zf-RING_5|PF14634.2|3.2e-07,zf-RING_11|PF17123.1|1.6e-06,zf-RING_11|PF17123.1|6.6e+03,zf-RING_UBOX|PF13445.2|4.9e-06,zf-RING_UBOX|PF13445.2|2.2e+02,zf-ANAPC11|PF12861.3|1.3e-05,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|5e-06 R_Transcript_116981:291-923(+)
ATGGGAGGTTGCTGTTGCTCTTCCAGAAAAGCTCAATTACATGGGACACCTGTGTATTACTATTGTCCACCATCTTTGGAAGAGCAGGAGATATTGAGACCATACGGTAGGACAGCCTCAGCACTGCCTGCAGGCATCCTTGTTGGACTAAACTTGGACACATCAAGCCCCGACACGTTCCGCCCCCCTCCTGCTCCTCTCCCTTTTAATGTAGTTTTTGGACACCCTCAAACTCCAATTCGATCACACCAAGGGGCCAAATGTGATGCAGCTGGACAAATTGAATCTGGAGCAATTGGAGACGATGCTGGTACTGATAGCTGCGAGACACTGAATCCAGGTGGCCATGCTGATAAACCAGAAGGAAAAACCCTTGCTGATATCTTGCTTGCATCACCCACAAAGTCTGATGTTGAAATTTCAAAGCCATCTGAGCCTCATCATTTAGCCATTGAGGAAGAAGATGCCTGCCCTATCTGTCTTGAAGAATATGACACAGAAAATCCAAAAATGATTACGAACTGTGAGCACGATTTTCATTTGTCATGCCTTCTTGAGTGGATGGAGAGAAGTGATGCCTGCCCAGTTTGTGATAAGGAAATGATATTTGATCACCCTGATGATCAGCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_116981.p1 GENE.R_Transcript_116981~~R_Transcript_116981.p1 ORF type:complete len:211 (+),score=51.82,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|8.6e-12,zf-rbx1|PF12678.3|5.3e-10,zf-C3HC4|PF00097.21|1e-08,zf-RING_5|PF14634.2|3.2e-07,zf-RING_11|PF17123.1|1.6e-06,zf-RING_11|PF17123.1|6.6e+03,zf-RING_UBOX|PF13445.2|4.9e-06,zf-RING_UBOX|PF13445.2|2.2e+02,zf-ANAPC11|PF12861.3|1.3e-05,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|5e-06 R_Transcript_116981:291-923(+)
MGGCCCSSRKAQLHGTPVYYYCPPSLEEQEILRPYGRTASALPAGILVGLNLDTSSPDTFRPPPAPLPFNVVFGHPQTPIRSHQGAKCDAAGQIESGAIGDDAGTDSCETLNPGGHADKPEGKTLADILLASPTKSDVEISKPSEPHHLAIEEEDACPICLEEYDTENPKMITNCEHDFHLSCLLEWMERSDACPVCDKEMIFDHPDDQL*

Click here to download the sequence:
Link to NCBI Protein BLAST