Transcript Information: R_Transcript_117046.p2


Annotated TAIR IDAT5G02860.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:654102-656561 | Forward length=819
E-Value1E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1972049254166
Replicate 22.5824326715233
Replicate 33.5523817662482
Condition 2: 8 Hour
Replicate 13.0116304480569
Replicate 22.271961256591
Replicate 34.2709672047969
Condition 3: 24 Hour
Replicate 12.700918497377
Replicate 22.2409086573314
Replicate 31.6386516877891


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117046.p2 GENE.R_Transcript_117046~~R_Transcript_117046.p2 ORF type:complete len:187 (+),score=33.10,PPR_2|PF13041.2|4.5e-05,PPR_2|PF13041.2|6.2e-11,PPR_2|PF13041.2|1.1e-13,PPR_2|PF13041.2|4e-09,PPR_2|PF13041.2|0.0023,PPR_1|PF12854.3|37,PPR_1|PF12854.3|0.061,PPR_1|PF12854.3|6e-12,PPR_1|PF12854.3|0.00037,PPR_1|PF12854.3|1.9e-08,PPR_1|PF12854.3|1.6e+03,PPR|PF01535.16|1.1,PPR|PF01535.16|4.2e-05,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|0.031,PPR|PF01535.16|0.0041,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.00058,PPR_3|PF13812.2|7.1e-06,PPR_3|PF13812.2|18,PPR_3|PF13812.2|1.6 R_Transcript_117046:2080-2640(+)
ATGGTTTCTATTTATGTTCGCCGGCAGATGGTTGACAAAGCTAATGAAATATTGGATTTCATGAAGCTGTCTGAATTTACTCCTAGCTTGACAACTTACAACACTTTGATGTACATGTACAGCCGGTCAGTTTGTTTTGAGAAAGCAGAAGAAGTTCTGGAAGAAATTGTTGCAAAAGGACTGAAGCCTGATATCATTTCATATAATACTGTTATTTTTGCTTGTTGTAGACATGGTCGTTTAAGGGATGCCTCTAGAGTTTTCTTGGAGATGAGGGGCTCGGGGATTGTGCCTGATGTGATAACTTGCAACATCTTTGTGTCAAGTTATGCTGCAAATGCAATGTTTGTAGAAGCCATTGATATGGTGCGGTGTATGATCACTGATAACTGTAGACCTAACCAGAATACATACAATTCCATTGTTGACTTTTACTGCAAATTCAACCGTCTAGATGAGGCTACCATGTTCATAAATAATCTCTGCAGGCTTGATCCACATCTCCCAAGGGATGAAGGATCAAGGTTATTGGAGCGAATAAGAAATAAATTTTCTAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117046.p2 GENE.R_Transcript_117046~~R_Transcript_117046.p2 ORF type:complete len:187 (+),score=33.10,PPR_2|PF13041.2|4.5e-05,PPR_2|PF13041.2|6.2e-11,PPR_2|PF13041.2|1.1e-13,PPR_2|PF13041.2|4e-09,PPR_2|PF13041.2|0.0023,PPR_1|PF12854.3|37,PPR_1|PF12854.3|0.061,PPR_1|PF12854.3|6e-12,PPR_1|PF12854.3|0.00037,PPR_1|PF12854.3|1.9e-08,PPR_1|PF12854.3|1.6e+03,PPR|PF01535.16|1.1,PPR|PF01535.16|4.2e-05,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|0.031,PPR|PF01535.16|0.0041,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.00058,PPR_3|PF13812.2|7.1e-06,PPR_3|PF13812.2|18,PPR_3|PF13812.2|1.6 R_Transcript_117046:2080-2640(+)
MVSIYVRRQMVDKANEILDFMKLSEFTPSLTTYNTLMYMYSRSVCFEKAEEVLEEIVAKGLKPDIISYNTVIFACCRHGRLRDASRVFLEMRGSGIVPDVITCNIFVSSYAANAMFVEAIDMVRCMITDNCRPNQNTYNSIVDFYCKFNRLDEATMFINNLCRLDPHLPRDEGSRLLERIRNKFSR*

Click here to download the sequence:
Link to NCBI Protein BLAST