Transcript Information: R_Transcript_117047.p1


Annotated TAIR IDAT5G37055.1
Annotated Gene NameHIT-type Zinc finger family protein
Annotated Gene Symbol(s)ATSWC6, SEF
Annotation TypeOrtholog
Chromosome Positionchr5:14641634-14642387 | Reverse length=171
E-Value6.4E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.770610741577
Replicate 216.531569868005
Replicate 320.932018837863
Condition 2: 8 Hour
Replicate 115.198123070704
Replicate 214.521722115253
Replicate 322.63735347485
Condition 3: 24 Hour
Replicate 124.013338594495
Replicate 223.829819950739
Replicate 321.384539061911


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_117047.p1 GENE.R_Transcript_117047~~R_Transcript_117047.p1 ORF type:complete len:174 (+),score=18.35,zf-HIT|PF04438.12|6.1e-09 R_Transcript_117047:196-717(+)
ATGGAGGACGATAACTCCGGTTCACTCCGGCGAATGTCGACGCGATCCCGTAGGGTCGCCCCTAAAATGGCTGCTGCTCTTGCCAGCTCGGATAATCGCACACAGGCGGCATTAGCACGGCTTGAAGCTCTGGAAAACGACAATGCAGGAATAGAAACAGTTGAGATCAATGATGATGACGAGGCCTCTCTTGATGATGACGATGATGAAGCTTATATACAGAGGAAGCATTCCATGAGTAAGCGGAAAACCCGGCAGGCAAAGGCTCGCGAAAATGCCAGAAAAGCTCCGAGAACGTTTCTAGAGCTTGTGCTCGAGGCGAATTTAGAGTCCTTGCCTCCTCATGTGCCCAGTTATTTGAGGGCGGCTGTAGGACCTCCGAGCTCTACAACACGGCGCAATTTCTGCACAGTTTGTGGGTTTTCCGCCAATTATACATGCGTGAGATGTGGTGTGCGTTTCTGCTGTATCCGATGCCAGAACATACACAATGATACCCGGTGTTTGAAATTCGTTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_117047.p1 GENE.R_Transcript_117047~~R_Transcript_117047.p1 ORF type:complete len:174 (+),score=18.35,zf-HIT|PF04438.12|6.1e-09 R_Transcript_117047:196-717(+)
MEDDNSGSLRRMSTRSRRVAPKMAAALASSDNRTQAALARLEALENDNAGIETVEINDDDEASLDDDDDEAYIQRKHSMSKRKTRQAKARENARKAPRTFLELVLEANLESLPPHVPSYLRAAVGPPSSTTRRNFCTVCGFSANYTCVRCGVRFCCIRCQNIHNDTRCLKFVA*

Click here to download the sequence:
Link to NCBI Protein BLAST